NCBI Blast:exam

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Job Title

exam_seq ...

RID

WDNBVR3K01R Search expires on 11-10 22:04 pm

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Program

TBLASTX

Citation

Database

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Nucleotide collection (nt) The nucleotide collection consists of GenBank+EMBL+DDBJ+PDB+RefSeq sequences, but excludes EST, STS, GSS, WGS, TSA, patent sequences as well as phase 0, 1, and 2 HTGS sequences and sequences longer than 100Mb. The database is non-redundant. Identical sequences have been merged into one entry, while preserving the accession, GI, title and taxonomy information for each entry. mixed DNA 2019/10/03

Query ID

lcl|Query_14613

Description

exam_seq ...

Molecule type

dna

Query Length

540

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Descriptions

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50 sequences selected

, Reading indexes 1-5, displaying indexes 1-5, Reading indexes 6-10, displaying indexes 6-10

Sequences producing significant alignments:
Select for downloading or viewing reports	Description	Max Score	Total Score	Query Cover	E value	N	Accession
1Select seq XM_025956239.1	PREDICTED: Panicum hallii protein HEADING DATE 3A (LOC112889541), mRNA	361	1353	97%	4e-97	Sumn1	XM_025956239.1
2Select seq KR423008.1	Oryza rufipogon flowering locus T1 variant 3 (RFT1) mRNA, complete cds	359	1576	95%	1e-96	Sumn1	KR423008.1
3Select seq KR423010.1	Oryza rufipogon flowering locus T1 variant 11 (RFT1) mRNA, complete cds	358	1568	95%	3e-96	Sumn1	KR423010.1
4Select seq AY705794.1	Triticum aestivum flowering locus T mRNA, complete cds	358	1320	97%	3e-96	Sumn1	AY705794.1
5Select seq KY444675.1	Bambusa multiplex isolate BmFTL2 flowering locus t-like protein mRNA, complete cds	358	1402	97%	4e-96	Sumn1	KY444675.1
6Select seq XM_020344564.1	PREDICTED: Aegilops tauschii subsp. tauschii protein HEADING DATE 3A (LOC109785977), mRNA	358	1301	97%	4e-96	Sumn1	XM_020344564.1
7Select seq AK376849.1	Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3142C18	356	1312	97%	9e-96	Sumn1	AK376849.1
8Select seq XM_004964742.3	PREDICTED: Setaria italica protein HEADING DATE 3A (LOC101767579), mRNA	355	1373	97%	2e-95	Sumn1	XM_004964742.3
9Select seq KC138805.1	Phalaenopsis hybrid cultivar phosphatidylethanolamine-binding protein (FT) mRNA, complete cds	355	1273	97%	2e-95	Sumn1	KC138805.1
10Select seq XM_006655748.2	PREDICTED: Oryza brachyantha protein HEADING DATE 3A (LOC102709849), mRNA	355	1502	100%	2e-95	Sumn1	XM_006655748.2
11Select seq KR423013.1	Oryza rufipogon cultivar PADI PADIAN /044/88/I4 flowering locus T1 variant 1 (RFT1) mRNA, complete cds	355	1536	95%	2e-95	Sumn1	KR423013.1
12Select seq KR423012.1	Oryza rufipogon cultivar MY-90-W33 flowering locus T1 variant 2 (RFT1) mRNA, complete cds	355	1536	95%	2e-95	Sumn1	KR423012.1
13Select seq XM_006655747.2	PREDICTED: Oryza brachyantha protein HEADING DATE 3A-like (LOC102709569), mRNA	354	1479	97%	5e-95	Sumn1	XM_006655747.2
14Select seq XM_002436464.2	PREDICTED: Sorghum bicolor protein HEADING DATE 3A (LOC8069174), mRNA	353	1340	98%	6e-95	Sumn1	XM_002436464.2
15Select seq KR423007.1	Oryza rufipogon cultivar MY-90-W60 flowering locus T1 variant 22 (RFT1) mRNA, complete cds	353	1496	95%	6e-95	Sumn1	KR423007.1
16Select seq KR423006.1	Oryza rufipogon cultivar ASP 5 flowering locus T1 variant 20 (RFT1) mRNA, complete cds	353	1500	95%	6e-95	Sumn1	KR423006.1
17Select seq LC020117.1	Sasa veitchii var. hirsuta SvFT1 mRNA for FT-like gene, complete cds, strain: SvFT1	351	1347	96%	3e-94	Sumn1	LC020117.1
18Select seq KR011268.1	Miscanthus sacchariflorus flowering locus T protein (FT2) mRNA, complete cds	343	1321	98%	7e-92	Sumn1	KR011268.1
19Select seq KC138734.1	Cymbidium faberi FT mRNA, complete cds	338	1250	97%	3e-90	Sumn1	KC138734.1
20Select seq NM_001293881.1	Malus domestica protein HEADING DATE 3A (LOC103434295), mRNA	337	756	85%	4e-90	Sumn1	NM_001293881.1
21Select seq AB458504.1	Malus x domestica MdFT2 mRNA for flowering locus T like protein, complete cds, cultivar: Fuji	337	780	94%	4e-90	Sumn1	AB458504.1
22Select seq XM_025957815.1	PREDICTED: Panicum hallii protein HEADING DATE 3A-like (LOC112890930), mRNA	337	1332	97%	4e-90	Sumn1	XM_025957815.1
23Select seq GQ465756.1	Malus x domestica cultivar Fuji flowering locus T (FT-3) mRNA, complete cds	334	666	85%	4e-89	Sumn1	GQ465756.1
24Select seq XM_021948448.1	PREDICTED: Prunus avium protein HEADING DATE 3A (LOC110748470), mRNA	334	770	95%	5e-89	Sumn1	XM_021948448.1
25Select seq KX644935.1	Prunus avium flowering locus T mRNA, partial cds	334	798	95%	5e-89	Sumn1	KX644935.1
26Select seq KP941772.1	Eriobotrya japonica FT2 (FT2) mRNA, complete cds	334	769	94%	5e-89	Sumn1	KP941772.1
27Select seq AB571595.3	Pyrus pyrifolia var. culta FT mRNA for flowering locus T, complete cds, clone: PpFT2a	334	765	94%	5e-89	Sumn1	AB571595.3
28Select seq AB668579.1	Pyrus pyrifolia PpFT2atw mRNA for flowering locus T, complete cds	334	765	94%	5e-89	Sumn1	AB668579.1
29Select seq GU324590.1	Secale cereale cultivar Puma VRN-3 mRNA, partial cds	334	1181	90%	5e-89	Sumn1	GU324590.1
30Select seq KM281665.1	Prunus pseudocerasus flowering locus T-like protein mRNA, partial cds	333	813	95%	7e-89	Sumn1	KM281665.1
31Select seq XM_020241468.1	PREDICTED: Ananas comosus protein HEADING DATE 3A-like (LOC109716147), mRNA	332	951	97%	1e-88	Sumn1	XM_020241468.1
32Select seq AB457620.1	Ficus carica FcFT mRNA for flowering locus T-like protein, complete cds	332	721	85%	2e-88	Sumn1	AB457620.1
33Select seq XM_027329656.1	PREDICTED: Coffea eugenioides protein HEADING DATE 3A-like (LOC113783506), transcript variant X2, mRNA	330	749	85%	5e-88	Sumn1	XM_027329656.1
34Select seq XM_027329655.1	PREDICTED: Coffea eugenioides protein HEADING DATE 3A-like (LOC113783506), transcript variant X1, mRNA	330	749	85%	5e-88	Sumn1	XM_027329655.1
35Select seq XM_010040260.2	PREDICTED: Eucalyptus grandis protein HEADING DATE 3A (LOC104427117), mRNA	330	827	87%	5e-88	Sumn1	XM_010040260.2
36Select seq MH845048.1	Platanus x hispanica FT-like protein mRNA, complete cds	330	853	95%	7e-88	Sumn1	MH845048.1
37Select seq XM_004965158.3	PREDICTED: Setaria italica protein HEADING DATE 3A (LOC101767043), mRNA	330	1274	94%	7e-88	Sumn1	XM_004965158.3
38Select seq XM_016018112.2	PREDICTED: Ziziphus jujuba protein HEADING DATE 3A (LOC107410660), mRNA	330	670	93%	7e-88	Sumn1	XM_016018112.2
39Select seq KR872844.1	Ziziphus jujuba flowering locus T protein (FT) mRNA, complete cds	330	670	93%	7e-88	Sumn1	KR872844.1
40Select seq XM_024043552.1	PREDICTED: Quercus suber protein HEADING DATE 3A-like (LOC112011172), mRNA	330	759	95%	9e-88	Sumn1	XM_024043552.1
41Select seq KY306475.1	Nicotiana sylvestris flowering locus T-d (FTd) mRNA, complete cds	330	656	92%	9e-88	Sumn1	KY306475.1
42Select seq XM_009777787.1	PREDICTED: Nicotiana sylvestris protein HEADING DATE 3A-like (LOC104225910), mRNA	330	656	92%	9e-88	Sumn1	XM_009777787.1
43Select seq XM_024333825.1	PREDICTED: Rosa chinensis protein HEADING DATE 3A (LOC112193618), transcript variant X1, mRNA	329	666	95%	1e-87	Sumn1	XM_024333825.1
44Select seq XM_028230371.1	PREDICTED: Camellia sinensis protein HEADING DATE 3A (LOC114287090), mRNA	329	806	95%	2e-87	Sumn1	XM_028230371.1
45Select seq AB741571.1	Camellia sinensis CsFT1 mRNA for flowering locus T, complete cds	329	806	95%	2e-87	Sumn1	AB741571.1
46Select seq KC149523.1	Camellia sinensis cultivar Longjing 43 flowering locus T mRNA, complete cds	329	806	95%	2e-87	Sumn1	KC149523.1
47Select seq AB161109.1	Populus nigra PnFT1b mRNA for flowering locus T, complete cds	329	754	87%	2e-87	Sumn1	AB161109.1
48Select seq AB106111.1	Populus nigra PnFT1a mRNA for flowering locus T, complete cds	329	756	87%	2e-87	Sumn1	AB106111.1
49Select seq XM_007205940.2	PREDICTED: Prunus persica protein HEADING DATE 3A (LOC18772119), mRNA	329	768	95%	2e-87	Sumn1	XM_007205940.2
50Select seq XM_016836529.1	PREDICTED: Gossypium hirsutum protein HEADING DATE 3A (LOC107909115), mRNA	328	774	94%	3e-87	Sumn1	XM_016836529.1

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Sequences producing significant alignments