Browse Element(s) Details


Os.44283.1.S1_x_at

Description gb:CB659047
DB_XREF= gi:29662772
DB_XREF=OSJNEc15K11.f
CLONE=OSJNEc15K11
TID=Os.44283.1
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.44283 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) glucuronosyl transferase-like protein (P0523A04.29), mRNA
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os07g1366011/11UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os07g13634Os.31358.1.S1_at11/117+7813746..7830553UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13634Os.28943.1.S1_x_at1/117+7813746..7830553UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13660Os.44283.1.S1_at11/117+7837068..7839562UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13660Os.44283.1.S1_x_at11/117+7837068..7839562UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13669NANA7+7845156..7845498NA
LOC_Os07g13680NANA7+7846883..7851771retrotransposon protein, putative, Ty3-gypsy subclass
LOC_Os07g13690NANA7+7853335..7856259retrotransposon protein, putative, unclassified
LOC_Os07g13700OsAffx.9167.1.S1_x_at1/117+7862777..7865689retrotransposon protein, putative, Ty3-gypsy subclass

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.44283.1.S1_x_at--695--8391Chr07:7838003..7838027 (25 bp)
GGCGCCGGCGTCTGTGCTCTACGTC
LOC_Os07g13660
Os.44283.1.S1_x_at--924--1571Chr07:7838094..7838118 (25 bp)
AGCGGACACCCGTTCCTCTGGGTGC
LOC_Os07g13660
Os.44283.1.S1_x_at--676--9111Chr07:7838314..7838338 (25 bp)
TGCTGCTCCGGCCATGCTTCGGCGA
LOC_Os07g13660
Os.44283.1.S1_x_at--72--631Chr07:7838327..7838351 (25 bp)
ATGCTTCGGCGACCAGCCGGGCAAC
LOC_Os07g13660
Os.44283.1.S1_x_at--1146--1711Chr07:7838338..7838362 (25 bp)
ACCAGCCGGGCAACGCGAGGTACGC
LOC_Os07g13660
Os.44283.1.S1_x_at--1149--7511Chr07:7838427..7838451 (25 bp)
GTGGAAGCCGCCATCAGGAGGCTCA
LOC_Os07g13660
Os.44283.1.S1_x_at--524--1671Chr07:7838432..7838456 (25 bp)
AGCCGCCATCAGGAGGCTCATGGAA
LOC_Os07g13660
Os.44283.1.S1_x_at--1008--5991Chr07:7838483..7838507 (25 bp)
GAGAGCCGGCGAGCTGAAGAGCAGA
LOC_Os07g13660
Os.44283.1.S1_x_at--310--5051Chr07:7838503..7838527 (25 bp)
GCAGAGCGGCGGAGTGCATCACCAA
LOC_Os07g13660
Os.44283.1.S1_x_at--515--4971Chr07:7838518..7838542 (25 bp)
GCATCACCAAGGCTGGCTCTTCTTG
LOC_Os07g13660
Os.44283.1.S1_x_at--830--4811Chr07:7838533..7838557 (25 bp)
GCTCTTCTTGCCTCATCATTGACAA
LOC_Os07g13660
Target Sequence 
GGCGCCGGCGTCTGTGCTCTACGTCAGCTTCGGCAGCATCGCCAGCGTGAGCGCCGGCGAGCTCGTCGAGGCGGCGTGGG
GCATCGCCAACAGCGGACACCCGTTCCTCTGGGTGCTCCGCCCGGGCCTCGTCCGCGGCGCCGCCGCCGCCGCCGCCCTC
CCCGACGGCTTCGACGCCGCGACGCGCGGCCGCGGCGCGGTGGTCAGCTGGGCGCCGCAGGAGGAGGTCCTGGCGCACCC
GGCGACCGCCGCGTTCTGGACGCACTGCGGCTGGAACTCGACGCTGGAGAGCGTCTGCGCCGGCGTGCCGATGCTGCTCC
GGCCATGCTTCGGCGACCAGCCGGGCAACGCGAGGTACGCGGAGCGCGTGTGGCGAGCCGGCCTCGCGCTCGACGGCGGC
GGCGGCGAGATGGAGAGGGGCAAGGTGGAAGCCGCCATCAGGAGGCTCATGGAAGAGGACGACGCCGCCGGAATGCGGCG
GAGAGCCGGCGAGCTGAAGAGCAGAGCGGCGGAGTGCATCACCAAGGCTGGCTCTTCTTGCCTCATCATTGACAA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.44283.1.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis