Browse Element(s) Details


OsAffx.4331.1.S1_at

Description tigr:9633.m01239
TID=OsAffx.4331.1
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=glyoxalase I, putative
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os05g1419410/11Lactoylglutathione lyase, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os05g14170Os.18769.1.S1_at11/115+7906427..7915722PQQ enzyme repeat-containing protein, putative, expressed
LOC_Os05g14180Os.11876.1.S1_s_at11/115+7930186..7933694Auxin-responsive protein IAA9, putative, expressed
LOC_Os05g14194Os.22487.1.S1_at11/115+7939353..7946068Lactoylglutathione lyase, putative, expressed
LOC_Os05g14194OsAffx.4331.1.S1_at10/115+7939353..7946068Lactoylglutathione lyase, putative, expressed
LOC_Os05g14210OsAffx.14684.1.S1_at11/115+7947180..7947746hypothetical protein
LOC_Os05g14220OsAffx.26878.1.S1_at11/115+7952449..7955131Protein kinase domain containing protein
LOC_Os05g14220Os.4820.1.S1_at1/115+7952449..7955131Protein kinase domain containing protein
LOC_Os05g14230NANA5+7960254..7960508hypothetical protein

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Gene Ontology Classification
GO idTypeName
GO:0005975biological_processcarbohydrate metabolism
GO:0004462molecular_functionlactoylglutathione lyase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.4331.1.S1_at--404--151Chr05:7943950..7943974 (25 bp)
ATTATTCATTCAGCAACTAATCTGT
LOC_Os05g14194
OsAffx.4331.1.S1_at--557--1471Chr05:7943939..7943963 (25 bp)
AGCAACTAATCTGTACTATATTTTC
LOC_Os05g14194
OsAffx.4331.1.S1_at--548--171Chr05:7943920..7943944 (25 bp)
ATTTTCATCATAAGGCATTTGGCAT
LOC_Os05g14194
OsAffx.4331.1.S1_at--163--3051NONE
AATCCCCAATACAAGGATATCTTGT
NONE
OsAffx.4331.1.S1_at--407--7951Chr05:7943185..7943209 (25 bp)
GGATATCTTGTGTCATGTTTGTCTT
LOC_Os05g14194
OsAffx.4331.1.S1_at--605--7451Chr05:7943176..7943200 (25 bp)
GTGTCATGTTTGTCTTATTCTTCGT
LOC_Os05g14194
OsAffx.4331.1.S1_at--377--7151Chr05:7943165..7943189 (25 bp)
GTCTTATTCTTCGTATTCACTCATG
LOC_Os05g14194
OsAffx.4331.1.S1_at--1002--6851Chr05:7943153..7943177 (25 bp)
GTATTCACTCATGAATCTGGAAACA
LOC_Os05g14194
OsAffx.4331.1.S1_at--404--2451Chr05:7943129..7943153 (25 bp)
AAAATATACTTCTCTGGCACAGTTG
LOC_Os05g14194
OsAffx.4331.1.S1_at--456--331Chr05:7943124..7943148 (25 bp)
ATACTTCTCTGGCACAGTTGCTATC
LOC_Os05g14194
OsAffx.4331.1.S1_at--1021--3771Chr05:7943118..7943142 (25 bp)
CTCTGGCACAGTTGCTATCCAAGCT
LOC_Os05g14194
Target Sequence 
ATTATTCATTCAGCAACTAATCTGTACTATATTTTCATCATAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAAT
CCCCAATACAAGGATATCTTGTGTCATGTTTGTCTTATTCTTCGTATTCACTCATGAATCTGGAAACAAAATATACTTCT
CTGGCACAGTTGCTATCCAAGCT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.4331.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis