Browse Element(s) Details


Os.26811.1.A1_at

Description gb:AU095771
DB_XREF= gi:8858453
DB_XREF=AU095771
CLONE=S10874
TID=Os.26811.1
CNT=2
FEA=EST
TIER=ConsEnd
STK=0
UG=Os.26811 (NCBI UniGene Cluster)
UG_TITLE=Transcribed sequence with weak similarity to protein ref:NP_182079.1 (A.thaliana) putative cytochrome P450 (Arabidopsis thaliana)
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os06g3978011/11Cytochrome P450 family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os06g39750Os.9286.1.S1_at11/116+23607741..23610099Fatty acid elongase, putative, expressed
LOC_Os06g39750Os.9286.1.S1_s_at11/116+23607741..23610099Fatty acid elongase, putative, expressed
LOC_Os06g39760Os.15810.2.S1_x_at11/116+23612191..23620156Serine-threonine kinase receptor-associated protein, putative, expressed
LOC_Os06g39770NANA6+23621875..23623844hypothetical protein
LOC_Os06g39780Os.26811.1.A1_at11/116+23631475..23633192Cytochrome P450 family protein, expressed
LOC_Os06g39790OsAffx.23796.1.S1_at1/116+23638497..23642513retrotransposon protein, putative, Ty1-copia subclass
LOC_Os06g39800OsAffx.28012.1.S1_at11/116+23648636..23648980hypothetical protein
LOC_Os06g39810OsAffx.5064.1.S1_at11/116+23652854..23653306hypothetical protein
LOC_Os06g39820OsAffx.28013.1.S1_at11/116+23655251..23659992retrotransposon protein, putative, unclassified, expressed

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Gene Ontology Classification
GO idTypeName
GO:0006118biological_processelectron transport
GO:0019825molecular_functionoxygen binding
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.26811.1.A1_at--480--4571Chr06:23632870..23632894 (25 bp)
GCGCGTCATGCCGTTCATACTTGCG
LOC_Os06g39780
Os.26811.1.A1_at--36--7131Chr06:23632874..23632898 (25 bp)
GTCATGCCGTTCATACTTGCGTCGA
LOC_Os06g39780
Os.26811.1.A1_at--1152--591Chr06:23632877..23632901 (25 bp)
ATGCCGTTCATACTTGCGTCGATGC
LOC_Os06g39780
Os.26811.1.A1_at--512--6992Chr06:23633033..23633057 (25 bp)
GTACGACTATATTATTAGCCCGGTA
LOC_Os06g39780
Os.26811.1.A1_at--8--2031Chr06:23633038..23633062 (25 bp)
ACTATATTATTAGCCCGGTAGTCAA
LOC_Os06g39780
Os.26811.1.A1_at--1075--10431Chr06:23633047..23633071 (25 bp)
TTAGCCCGGTAGTCAATATTAGTTT
LOC_Os06g39780
Os.26811.1.A1_at--467--3971Chr06:23633053..23633077 (25 bp)
CGGTAGTCAATATTAGTTTTTCAAT
LOC_Os06g39780
Os.26811.1.A1_at--335--6791Chr06:23633068..23633092 (25 bp)
GTTTTTCAATATATGGGACCAGTCG
LOC_Os06g39780
Os.26811.1.A1_at--841--3111Chr06:23633075..23633099 (25 bp)
AATATATGGGACCAGTCGCACGAGA
LOC_Os06g39780
Os.26811.1.A1_at--236--271Chr06:23633078..23633102 (25 bp)
ATATGGGACCAGTCGCACGAGAATA
LOC_Os06g39780
Os.26811.1.A1_at--479--7631Chr06:23633082..23633106 (25 bp)
GGGACCAGTCGCACGAGAATAATAT
LOC_Os06g39780
Target Sequence 
GCGCGTCATGCCGTTCATACTTGCGTCGATGCTGCACACGTTCGAGTGGAAGCTCCCCGGCGGCATGACAGCGGAGGACG
TGGACGTGTCCGAGAAGTTCAAGTCTGCCAATGTGCTTGCTGTGCCTCTCAAGGCCGTGCCTGTCCTGATCAAATAGTCG
GACGTACGACTATATTATTAGCCCGGTAGTCAATATTAGTTTTTCAATATATGGGACCAGTCGCACGAGAATAATAT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.26811.1.A1_at     

Putative homologies in rice

Putative homologies in arabidopsis