Browse Element(s) Details


Os.27313.1.A1_at

Description gb:CB661274
DB_XREF= gi:29664999
DB_XREF=OSJNEd03O11.r
CLONE=OSJNEd03O11
TID=Os.27313.1
CNT=2
FEA=EST
TIER=ConsEnd
STK=1
UG=Os.27313 (NCBI UniGene Cluster)
UG_TITLE=Transcribed sequence with weak similarity to protein ref:NP_566297.1 (A.thaliana) UDP-glucose:sterol glucosyltransferase (Arabidopsis thaliana)
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os07g2375011/11Sterol 3-beta-glucosyltransferase, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os07g23710Os.9017.1.S1_x_at3/117+13381137..13382436Cytochrome P450 family protein
LOC_Os07g23720Os.51151.1.S1_at11/117+13382752..13384349K+ channel tetramerisation domain containing protein, expressed
LOC_Os07g23730Os.52889.1.S1_at11/117+13387132..13390394Thaumatin family protein, expressed
LOC_Os07g23740OsAffx.28558.1.S1_at11/117+13398473..13400871hypothetical protein
LOC_Os07g23750Os.27313.1.A1_at11/117+13403550..13410326Sterol 3-beta-glucosyltransferase, putative, expressed
LOC_Os07g23760NANA7+13418259..13419015hypothetical protein
LOC_Os07g23770OsAffx.5417.1.S1_at10/117+13424155..13425342hypothetical protein
LOC_Os07g23780OsAffx.28559.1.S1_at11/117+13431609..13431995hypothetical protein
LOC_Os07g23790Os.11647.2.S1_a_at11/117+13435053..13438500expressed protein

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Gene Ontology Classification
GO idTypeName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.27313.1.A1_at--316--1771Chr07:13408756..13408780 (25 bp)
ACCTGTCCCTGTGGAGCAATTACAA
LOC_Os07g23750
Os.27313.1.A1_at--1120--131Chr07:13408774..13408798 (25 bp)
ATTACAATTGCATCTACTGGTTGAT
LOC_Os07g23750
Os.27313.1.A1_at--1001--4931Chr07:13409897..13409921 (25 bp)
GCATTTTTGAAACATCTCCCACAGC
LOC_Os07g23750
Os.27313.1.A1_at--1123--4351Chr07:13409915..13409939 (25 bp)
CCACAGCCCAGGAGCCTTGAGAAGC
LOC_Os07g23750
Os.27313.1.A1_at--1018--491Chr07:13409956..13409980 (25 bp)
ATCGTCAACCTTCATGCAGCCCTTT
LOC_Os07g23750
Os.27313.1.A1_at--200--10591Chr07:13409979..13410003 (25 bp)
TTCTCCTCCCCGTAAAGAGATGTTT
LOC_Os07g23750
Os.27313.1.A1_at--1001--2331Chr07:13409992..13410016 (25 bp)
AAAGAGATGTTTTGGCATCGCCACA
LOC_Os07g23750
Os.27313.1.A1_at--103--10251Chr07:13410002..13410026 (25 bp)
TTTGGCATCGCCACATAGTCCGTTG
LOC_Os07g23750
Os.27313.1.A1_at--52--2091Chr07:13410014..13410038 (25 bp)
ACATAGTCCGTTGCTCTCAAGCAAT
LOC_Os07g23750
Os.27313.1.A1_at--658--8051Chr07:13410154..13410178 (25 bp)
GGAGAGATTGTTCTTACCTTAATTT
LOC_Os07g23750
Os.27313.1.A1_at--242--2171Chr07:13410180..13410204 (25 bp)
ACACCTGTTCAGCTGTTATAGCTTG
LOC_Os07g23750
Target Sequence 
ACCTGTCCCTGTGGAGCAATTACAATTGCATCTACTGGTTGATGCNATTAAATTTATGATGGNTCCAAAGGTGAAGGAGA
GAGCTGTTGAGCTAGCAAAAGCAATTGAATCGGAAGATGGCNTTGACGGGGCAGTGAAAGCATTTTTGAAACATCTCCCA
CAGCCCAGGAGCCTTGAGAAGCNGCAGCCTGCACCGCCATCGTCAACCTTCATGCAGCCCTTTCTCCTCCCCGTAAAGAG
ATGTTTTGGCATCGCCACATAGTCCGTTGCTCTCAAGCAATNGTGTTAATATTTTGGCAACACAACCAACAACCATGTTA
AAAGAGAAANGCTCTCCTATAGTTTTTGTTCNNGTCACAGTATAGAATGAGCGGTNTCCTGCAGTTTTNTTCAAACGTGG
AGAGATTGTTCTTACCTTAATTTAACACCTGTTCAGCTGTTATAGCTTG

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.27313.1.A1_at     

Putative homologies in rice

Putative homologies in arabidopsis