Browse Element(s) Details


OsAffx.11989.2.S1_s_at

Description tigr:9630.m01045
TID=OsAffx.11989.2
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=flavonoid glucosyl-transferase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os02g1164011/11Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g117001/11Cytokinin-O-glucosyltransferase 1, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os02g11110Os.8044.1.S1_at11/112+5955000..5957276Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11110Os.8044.2.S1_at11/112+5955000..5957276Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11110Os.8044.1.S1_x_at11/112+5955000..5957276Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11120Os.40360.1.S1_x_at1/112+5962254..5963919hypothetical protein
LOC_Os02g11130Os.8044.1.S1_x_at3/112+5966053..5967636Cytokinin-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11636NANA2+5970553..5971719transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os02g11640OsAffx.11989.2.S1_s_at11/112+5978154..5979949Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11650Os.31845.1.S1_x_at1/112+5983252..5986466hypothetical protein
LOC_Os02g11660OsAffx.22699.1.S1_x_at3/112+5987067..5993073retrotransposon protein, putative, unclassified
LOC_Os02g11660Os.45161.1.A1_x_at2/112+5987067..5993073retrotransposon protein, putative, unclassified
LOC_Os02g11660Os.52731.1.S1_at1/112+5987067..5993073retrotransposon protein, putative, unclassified
LOC_Os02g11670OsAffx.11989.1.S1_at11/112+6002790..6003758Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.11989.2.S1_s_at--1136--9332Chr02:6017519..6017543 (25 bp)
TCGCGCGGGCGGTGTCAAAGCTCAT
LOC_Os02g11700
OsAffx.11989.2.S1_s_at--813--3031Chr02:5978343..5978367 (25 bp)
AATCCAGAAGTTACACACTGTTTTC
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--331--5331Chr02:5978337..5978361 (25 bp)
GAAGTTACACACTGTTTTCTGAATA
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--306--3311Chr02:5978330..5978354 (25 bp)
CACACTGTTTTCTGAATATTTTTCC
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--836--10291Chr02:5978310..5978334 (25 bp)
TTTCCTTTTTGTTGGCATCAGATTT
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--349--10391Chr02:5978304..5978328 (25 bp)
TTTTGTTGGCATCAGATTTACACTG
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--859--6531Chr02:5978290..5978314 (25 bp)
GATTTACACTGATTTACTTCTTCAA
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--1041--2171Chr02:5978285..5978309 (25 bp)
ACACTGATTTACTTCTTCAAGTCAT
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--725--3651Chr02:5978274..5978298 (25 bp)
CTTCTTCAAGTCATCTGTGTTTCTT
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--84--2851Chr02:5978267..5978291 (25 bp)
AAGTCATCTGTGTTTCTTATTCTGA
LOC_Os02g11640
OsAffx.11989.2.S1_s_at--521--7131Chr02:5978265..5978289 (25 bp)
GTCATCTGTGTTTCTTATTCTGAAG
LOC_Os02g11640
Target Sequence 
TCGCGCGGGCGGTGTCAAAGCTCATGGACNGCGGCGAGGNNNAGNCCGNCGAGAGGAGGAGGAAGGCNAAGGAGTACGGG
GAGAAAGCTCNCAGAGCCATGGAGAAAGGNGGNTCCTCGTANGAAAGCCTGACGCAGCTGATACNCNGCTTCACCCTGCA
GGNANCNAANAACNCNNNNNNNNNNNNANNAGNGNNNNNNNNAANNANNNNNNNTTNNAATCCAGAAGTTACACACTGTT
TTCTGAATATTTTTCCTTTTTGTTGGCATCAGATTTACACTGATTTACTTCTTCAAGTCATCTGTGTTTCTTATTCTGAA
G

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.11989.2.S1_s_at     

Putative homologies in rice

Putative homologies in arabidopsis