Browse Element(s) Details


Os.8044.1.S1_at

Description gb:AK066593.1
DB_XREF= gi:32976611
TID=Os.8044.1
CNT=3
FEA=FLmRNA
TIER=FL
STK=1
UG=Os.8044 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) cDNA clone:J013073P05, full insert sequence
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J013073P05, full insert sequence.
FL= gb:AK066593.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os02g1111011/11Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os02g11060Os.54034.1.S1_at11/112+5924727..5930096Serine-threonine kinase receptor-associated protein, putative, expressed
LOC_Os02g11070Os.11952.1.S1_at11/112+5930197..5933077Fatty acid elongase, putative, expressed
LOC_Os02g11080OsAffx.11984.1.S1_at10/112+5935644..5936940hypothetical protein
LOC_Os02g11090OsAffx.3761.1.S1_x_at1/112+5943967..5946323hypothetical protein
LOC_Os02g11100OsAffx.11986.1.S1_at11/112+5952319..5952699hypothetical protein
LOC_Os02g11110Os.8044.1.S1_at11/112+5955000..5957276Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11110Os.8044.2.S1_at11/112+5955000..5957276Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11110Os.8044.1.S1_x_at11/112+5955000..5957276Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11120Os.40360.1.S1_x_at1/112+5962254..5963919hypothetical protein
LOC_Os02g11130Os.8044.1.S1_x_at3/112+5966053..5967636Cytokinin-O-glucosyltransferase 1, putative, expressed
LOC_Os02g11636NANA2+5970553..5971719transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os02g11640OsAffx.11989.2.S1_s_at11/112+5978154..5979949Flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.8044.1.S1_at--676--651Chr02:5955710..5955734 (25 bp)
ATGAGCTTGTAAGATTTTCAACTGC
LOC_Os02g11110
Os.8044.1.S1_at--663--5591Chr02:5955590..5955614 (25 bp)
GAAATTTCAGGAATATCGGAACGCT
LOC_Os02g11110
Os.8044.1.S1_at--1017--10311Chr02:5955586..5955610 (25 bp)
TTTCAGGAATATCGGAACGCTTTTT
LOC_Os02g11110
Os.8044.1.S1_at--553--8191Chr02:5955581..5955605 (25 bp)
GGAATATCGGAACGCTTTTTTGCAA
LOC_Os02g11110
Os.8044.1.S1_at--186--3051Chr02:5955579..5955603 (25 bp)
AATATCGGAACGCTTTTTTGCAATA
LOC_Os02g11110
Os.8044.1.S1_at--392--10131Chr02:5955577..5955601 (25 bp)
TATCGGAACGCTTTTTTGCAATAGA
LOC_Os02g11110
Os.8044.1.S1_at--878--1051Chr02:5955574..5955598 (25 bp)
CGGAACGCTTTTTTGCAATAGAAGT
LOC_Os02g11110
Os.8044.1.S1_at--471--2111Chr02:5955540..5955564 (25 bp)
ACATGTGAATGTTTTATAGAAGCGA
LOC_Os02g11110
Os.8044.1.S1_at--633--10351Chr02:5955529..5955553 (25 bp)
TTTTATAGAAGCGAACAATGTTACA
LOC_Os02g11110
Os.8044.1.S1_at--456--2231Chr02:5955515..5955539 (25 bp)
ACAATGTTACATTTAGGACAGGAAA
LOC_Os02g11110
Os.8044.1.S1_at--34--5551Chr02:5955479..5955503 (25 bp)
GAAACTGACAGAATTGTGTTCTTGT
LOC_Os02g11110
Target Sequence 
ATGAGCTTGTAAGATTTTCAACTGCATACTCCANANAGCAATTTNTACCGAGTAGTCGCTTNCTTTGTTCAGGTTCGTTT
TCCNCCGAAATCCGGAAATTTCGGGGTCNCCGAAATCNCAGAAATTTCAGGAATATCGGAACGCTTTTTTGCAATAGAAG
TNTAGAAGCTACATGTGAATGTTTTATAGAAGCGAACAATGTTACATTTAGGACAGGAAAAAAAAGGTGAAGAAACTGAC
AGAATTGTGTTCTTGT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.8044.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis