Browse Element(s) Details


OsAffx.24252.1.S1_x_at

Description tigr:9630.m01355
TID=OsAffx.24252.1
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=UDP-glucoronosyl and UDP-glucosyl transferase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os02g1457011/11UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os02g145403/11hydroquinone glucosyltransferase, putative
LOC_Os03g441802/11hypothetical protein
LOC_Os02g145901/11UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os02g146801/11UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os02g14530Os.8740.1.S1_at10/112+8004992..8017327protein kinase family protein, putative, expressed
LOC_Os02g14540OsAffx.24252.1.S1_x_at3/112+8018191..8019354hydroquinone glucosyltransferase, putative
LOC_Os02g14550OsAffx.23366.2.S1_s_at1/112+8021940..8026355transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os02g14560Os.46314.3.S1_at3/112+8027852..8031438transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os02g14560OsAffx.7362.1.S1_x_at1/112+8027852..8031438transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os02g14570OsAffx.24252.1.S1_x_at11/112+8033998..8035452UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os02g14580OsAffx.12037.1.S1_at11/112+8041112..8048125retrotransposon protein, putative, unclassified
LOC_Os02g14590OsAffx.24252.1.S1_x_at1/112+8052103..8053518UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os02g14600Os.38686.1.S1_at9/112+8057679..8059665Glutelin type-B 4 precursor, putative, expressed

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Gene Ontology Classification
GO idTypeName
GO:0006805biological_processxenobiotic metabolism
GO:0009636biological_processresponse to toxin
GO:0009808biological_processlignin metabolism
GO:0042178biological_processxenobiotic catabolism
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
GO:0035251molecular_functionUDP-glucosyltransferase activity
GO:0047209molecular_functionconiferyl-alcohol glucosyltransferase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.24252.1.S1_x_at--284--2132Chr02:8034515..8034539 (25 bp)
ACAGGTTCCTCTGGGTGGTGCGCAT
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--857--3511Chr02:8034493..8034517 (25 bp)
CATGCCAAGAAAGGGCGGGCTCCTT
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--833--2311Chr02:8034484..8034508 (25 bp)
AAAGGGCGGGCTCCTTTCCTCCATG
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--566--791Chr02:8034462..8034486 (25 bp)
ATGGGCGCCAGCTACGGCAACCCGA
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--265--3391Chr02:8034454..8034478 (25 bp)
CAGCTACGGCAACCCGATGGACTTC
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--825--6232Chr02:8034439..8034463 (25 bp)
GATGGACTTCCTCCCCGAGGGCTTC
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--14--2553Chr03:24783552..24783572 (21 bp)
AACTCGGCGCTGGAGAGCGTGTCCT
LOC_Os03g44180
OsAffx.24252.1.S1_x_at--716--4232Chr02:8034276..8034300 (25 bp)
CCGATGATCGCGTGGCCGCTGCACG
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--414--671Chr02:8034240..8034264 (25 bp)
ATGAACGCGGCCATCCTGACGGAGG
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--63--8471Chr02:8034206..8034230 (25 bp)
TGGCGCTACCGCTAAGTCCGGTGGC
LOC_Os02g14570
OsAffx.24252.1.S1_x_at--1085--8353Chr03:24783705..24783729 (25 bp)
GGCGGTGAAGGAGCTCATGGATCCA
LOC_Os03g44180
Target Sequence 
ACAGGTTCCTCTGGGTGGTGCGCATGCCAAGAAAGGGCGGGCTCCTTTCCTCCATGGGCGCCAGCTACGGCAACCCGATG
GACTTCCTCCCCGAGGGCTTCGTGGAGAGGACGAACGGGCGGGGCCTCGCCGTGGCGTCGTGGGCGCCGCAGGTGCGCGT
GCTGGCGCACCCGGCGACGGCGGCGTTCGTGTCGCACTGCGGGTGGAACTCGGCGCTGGAGAGCGTGTCCTCCGGCGTGC
CGATGATCGCGTGGCCGCTGCACGCCGAGCAGAAGATGAACGCGGCCATCCTGACGGAGGTAGCCGGGGTGGCGCTACCG
CTAAGTCCGGTGGCGCCCGGCGGCGTGGTGTCGCGGGAGGAGGTGGCGGCGGCGGTGAAGGAGCTCATGGATCCA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.24252.1.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis