Browse Element(s) Details


OsAffx.16605.1.S1_at

Description tigr:9635.m03775
TID=OsAffx.16605.1
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=Cytochrome P450
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os07g3797011/11Cytochrome P450 51, putative
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os07g37930OsAffx.16603.1.S1_at11/117+22758973..22760328hypothetical protein
LOC_Os07g37940NANA7+22764427..22766233hypothetical protein
LOC_Os07g37950Os.30337.1.S1_at11/117+22772455..22773493disease resistance protein, putative, expressed
LOC_Os07g37960OsAffx.22483.1.S1_at11/117+22778414..22781911exostosin family protein, putative, expressed
LOC_Os07g37970OsAffx.16605.1.S1_at11/117+22783473..22785671Cytochrome P450 51, putative
LOC_Os07g37980OsAffx.28806.1.S1_at11/117+22787237..22789492Cytochrome P450 51, putative
LOC_Os07g37990Os.10954.1.S1_at11/117+22790068..22796708Alpha 1,4-glycosyltransferase conserved region family protein, expressed
LOC_Os07g37990Os.18186.1.S1_at1/117+22790068..22796708Alpha 1,4-glycosyltransferase conserved region family protein, expressed
LOC_Os07g38000Os.37602.2.S1_x_at11/117+22797160..22798498Cytochrome c family protein, expressed
LOC_Os07g38000Os.37602.1.S1_at11/117+22797160..22798498Cytochrome c family protein, expressed
LOC_Os07g38010NANA7+22800855..22801187hypothetical protein
LOC_Os07g38020OsAffx.16606.1.A1_at3/117+22803962..22804693hypothetical protein
LOC_Os07g38030Os.37032.1.S1_a_at11/117+22806023..22807670GRAS family transcription factor containing protein, expressed
LOC_Os07g38040OsAffx.28808.1.S1_at11/117+22810054..22810287expressed protein

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Gene Ontology Classification
GO idTypeName
GO:0016126biological_processsterol biosynthesis
GO:0008398molecular_functionsterol 14-demethylase activity
GO:0019825molecular_functionoxygen binding
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.16605.1.S1_at--462--3391Chr07:22785153..22785177 (25 bp)
CAGCGGCGGCTCATCGGTGACGACC
LOC_Os07g37970
OsAffx.16605.1.S1_at--1040--2151Chr07:22785340..22785364 (25 bp)
ACAGCGTCGTGTCGTATGCCGCGTT
LOC_Os07g37970
OsAffx.16605.1.S1_at--953--7191Chr07:22785345..22785369 (25 bp)
GTCGTGTCGTATGCCGCGTTCAACC
LOC_Os07g37970
OsAffx.16605.1.S1_at--1002--5171Chr07:22785454..22785478 (25 bp)
GCAAGTTCTCCTTCACGGCGTTCGG
LOC_Os07g37970
OsAffx.16605.1.S1_at--683--8251Chr07:22785487..22785511 (25 bp)
GGCACGCGTGCCTCGGCGAGCACTA
LOC_Os07g37970
OsAffx.16605.1.S1_at--72--5951Chr07:22785504..22785528 (25 bp)
GAGCACTACGCGTTCCTGAAGATGA
LOC_Os07g37970
OsAffx.16605.1.S1_at--289--5311Chr07:22785527..22785551 (25 bp)
GAAGGTAATATGGAGCTATTTGCTG
LOC_Os07g37970
OsAffx.16605.1.S1_at--833--10751Chr07:22785559..22785583 (25 bp)
TTGAGCTTGAGCTGGTCTCGCCTTT
LOC_Os07g37970
OsAffx.16605.1.S1_at--451--8591Chr07:22785571..22785595 (25 bp)
TGGTCTCGCCTTTCCCCGAGGTTGA
LOC_Os07g37970
OsAffx.16605.1.S1_at--732--6951Chr07:22785582..22785606 (25 bp)
TTCCCCGAGGTTGAACTCAACAACA
LOC_Os07g37970
OsAffx.16605.1.S1_at--1131--2451Chr07:22785600..22785624 (25 bp)
AACAACATAATGCTAGGGCCGCGAG
LOC_Os07g37970
Target Sequence 
CAGCGGCGGCTCATCGGTGACGACCGCGTCGACTACGACGCGCTGACGACGGGGATGAGCACGCTCCACCGCTGCATCAA
GGAGGCGCTCCGGATGCACCCGCCGGCGCCGGCGCTCGTCCGCACCGTGCGCAGGGGCTTCGCCGTGTGGACCAGGGAAG
GGAAGGAGTACAGGATGCCGGCAGGGCACAGCGTCGTGTCGTATGCCGCGTTCAACCACCGCCTCGGCTACGTGTACCGC
GACCCCGACGAGTACGACCCGGAGCGGTTCGGCCCGGAGAGGAAGGAGGACAGGGTCGCCGGCAAGTTCTCCTTCACGGC
GTTCGGGGGCGGGAGGCACGCGTGCCTCGGCGAGCACTACGCGTTCCTGAAGATGAAGGTAATATGGAGCTATTTGCTGA
GGAATTTTGAGCTTGAGCTGGTCTCGCCTTTCCCCGAGGTTGAACTCAACAACATAATGCTAGGGCCGCGAG

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.16605.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis