Browse Element(s) Details


OsAffx.27314.1.S1_at

Description tigr:9633.m04222
TID=OsAffx.27314.1
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=Similar to UDP-glycose:flavonoid glycosyltransferase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os05g4515010/11Anthocyanidin 5,3-O-glucosyltransferase, putative
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os05g45070Os.55637.1.S1_at11/115+26106383..26107353Harpin-induced protein 1 containing protein, expressed
LOC_Os05g45080Os.52346.1.S1_at11/115+26109666..26111485UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os05g45090NANA5+26113120..26114481UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os05g45100NANA5+26115286..26116849UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os05g45110Os.52713.1.S1_at2/115+26118087..26119505UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os05g45120NANA5+26122891..26123175Anthocyanidin 5,3-O-glucosyltransferase, putative
LOC_Os05g45130Os.52789.1.S1_at11/115+26123671..26125446retrotransposon protein, putative, Ty1-copia subclass, expressed
LOC_Os05g45140OsAffx.15110.1.S1_at11/115+26128341..26129162UDP-glycosyltransfersase, putative
LOC_Os05g45150OsAffx.27314.1.S1_at10/115+26132020..26134877Anthocyanidin 5,3-O-glucosyltransferase, putative
LOC_Os05g45160NANA5+26135286..26139326retrotransposon protein, putative, unclassified
LOC_Os05g45170Os.48555.1.S1_at11/115+26140159..26141126expressed protein
LOC_Os05g45180Os.51124.1.S1_at11/115+26142402..26144398UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os05g45190OsAffx.15111.1.S1_at8/115+26147547..26148183hypothetical protein
LOC_Os05g45200Os.57078.1.S1_at11/115+26152346..26153859UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os05g45210Os.47765.1.S1_at10/115+26154233..26162628respiratory burst oxidase homolog, putative, expressed

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Gene Ontology Classification
GO idTypeName
GO:0006805biological_processxenobiotic metabolism
GO:0009636biological_processresponse to toxin
GO:0042178biological_processxenobiotic catabolism
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
GO:0035251molecular_functionUDP-glucosyltransferase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.27314.1.S1_at--288--10291NONE
TTTGCCCGCCGAGGAAAGCGGAAGT
NONE
OsAffx.27314.1.S1_at--798--2611Chr05:26132417..26132441 (25 bp)
AACCGCCGTTGTGCCGTGGTCTGGA
LOC_Os05g45150
OsAffx.27314.1.S1_at--887--7171Chr05:26132399..26132423 (25 bp)
GTCTGGATCGCCATCCACTCAGTTG
LOC_Os05g45150
OsAffx.27314.1.S1_at--611--9651Chr05:26132381..26132405 (25 bp)
TCAGTTGCCTATCGTCGCTGAGGTC
LOC_Os05g45150
OsAffx.27314.1.S1_at--781--10151Chr05:26132372..26132396 (25 bp)
TATCGTCGCTGAGGTCTGGGCCGCC
LOC_Os05g45150
OsAffx.27314.1.S1_at--208--10651Chr05:26132262..26132286 (25 bp)
TTCGCTGTCGGCGTCCACGGATATG
LOC_Os05g45150
OsAffx.27314.1.S1_at--1029--4351Chr05:26132248..26132272 (25 bp)
CCACGGATATGGATCGGAGGACCTC
LOC_Os05g45150
OsAffx.27314.1.S1_at--402--271Chr05:26132242..26132266 (25 bp)
ATATGGATCGGAGGACCTCGTTGGA
LOC_Os05g45150
OsAffx.27314.1.S1_at--507--7771Chr05:26132210..26132234 (25 bp)
GGTGCACCGACCTCGAGCGCATTGG
LOC_Os05g45150
OsAffx.27314.1.S1_at--459--7851Chr05:26132064..26132088 (25 bp)
GGTAGTGAGCCTAACATATGGGACT
LOC_Os05g45150
OsAffx.27314.1.S1_at--982--3571Chr05:26132050..26132074 (25 bp)
CATATGGGACTCACTATTTAGGTTG
LOC_Os05g45150
Target Sequence 
TTTGCCCGCCGAGGAAAGCGGAAGTGGGAGGCGCCCCACTGCGGCGCGATAGCAAGGAGGGAGGATGGCGAGCCGGAGCC
GAAGCTTTGCCGCCCCGCTGCCCCTACCCTCCCTTTCCCTGCCCTCTTGCGCCATCTCCCGTGCTCGCCTCGTTCGCCAT
CTGCACAACCGCCGTTGTGCCGTGGTCTGGATCGCCATCCACTCAGTTGCCTATCGTCGCTGAGGTCTGGGCCGCCATCC
GCCACCACCTTCATCTTCACCACCTCCCGTGCTCACCTCTCCGCCACCATCGTCATCGGGGCCGCCATCCCCACCGCCAA
CTTCGCTGTCGGCGTCCACGGATATGGATCGGAGGACCTCGTTGGAGGCAGCGGGTGCACCGACCTCGAGCGCATTGGGG
AATGCTATGGCGGCGTGGGCGGGGACCAGGGGTGGCAGTGTGGCGGTGGGGATGAGAGAGGCGGTGGTATGGAGAGAGAG
GAGAAGAATAGGAGAGAGGGAGAGGAGGGGTTGAAAAAGGGTAGTGAGCCTAACATATGGGACTCACTATTTAGGTTG

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.27314.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis