Browse Element(s) Details


OsAffx.28764.1.S1_at

Description tigr:9635.m03515
TID=OsAffx.28764.1
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=MBOAT family
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os07g3557011/11MBOAT family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os07g35540OsAffx.5535.1.S1_x_at11/117+21264348..21267617Protein kinase domain containing protein, expressed
LOC_Os07g35540OsAffx.5535.1.S1_at11/117+21264348..21267617Protein kinase domain containing protein, expressed
LOC_Os07g35540Os.31858.2.S1_x_at1/117+21264348..21267617Protein kinase domain containing protein, expressed
LOC_Os07g35540Os.26816.1.A1_s_at1/117+21264348..21267617Protein kinase domain containing protein, expressed
LOC_Os07g35550NANA7+21269020..21269436transposon protein, putative, unclassified
LOC_Os07g35560Os.27755.1.S1_at11/117+21278612..21280941Glycosyl hydrolases family 17 protein, expressed
LOC_Os07g35570OsAffx.28764.1.S1_at11/117+21291434..21292444MBOAT family protein, expressed
LOC_Os07g35580Os.19978.1.S1_at11/117+21293506..21297882Protein kinase domain containing protein, expressed
LOC_Os07g35600Os.54578.1.S1_at11/117+21297939..21309645expressed protein
LOC_Os07g35600OsAffx.28765.1.S1_at1/117+21297939..21309645expressed protein
LOC_Os07g35610OsAffx.16571.1.S1_at10/117+21313950..21318698Kelch motif family protein, expressed

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Gene Ontology Classification
GO idTypeName
GO:0008415molecular_functionacyltransferase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.28764.1.S1_at--517--10631Chr07:21292003..21292027 (25 bp)
TTCGACGGCGCGCACGTCTACCTGA
LOC_Os07g35570
OsAffx.28764.1.S1_at--647--4151Chr07:21291995..21292019 (25 bp)
CGCGCACGTCTACCTGATGCTGGAG
LOC_Os07g35570
OsAffx.28764.1.S1_at--1032--1891Chr07:21291990..21292014 (25 bp)
ACGTCTACCTGATGCTGGAGCTCTT
LOC_Os07g35570
OsAffx.28764.1.S1_at--988--7151Chr07:21291988..21292012 (25 bp)
GTCTACCTGATGCTGGAGCTCTTCC
LOC_Os07g35570
OsAffx.28764.1.S1_at--932--8311Chr07:21291753..21291777 (25 bp)
GGCTCATGCACGAGGTGCTGTTCTA
LOC_Os07g35570
OsAffx.28764.1.S1_at--884--3751Chr07:21291751..21291775 (25 bp)
CTCATGCACGAGGTGCTGTTCTACT
LOC_Os07g35570
OsAffx.28764.1.S1_at--621--1711Chr07:21291703..21291727 (25 bp)
ACCACGGGCGAGGTGACCGCGTTCT
LOC_Os07g35570
OsAffx.28764.1.S1_at--769--1911Chr07:21291701..21291725 (25 bp)
CACGGGCGAGGTGACCGCGTTCTTC
LOC_Os07g35570
OsAffx.28764.1.S1_at--406--7491Chr07:21291644..21291668 (25 bp)
GTGGTGGCTGGAAGAAGCTCGTCGT
LOC_Os07g35570
OsAffx.28764.1.S1_at--875--7791Chr07:21291546..21291570 (25 bp)
GGTCGTGGCTGTTCTTCGCGCCGGT
LOC_Os07g35570
OsAffx.28764.1.S1_at--329--3651Chr07:21291467..21291491 (25 bp)
CTTCTTGGAAGAGGCCGGGTGGAAG
LOC_Os07g35570
Target Sequence 
TTCGACGGCGCGCACGTCTACCTGATGCTGGAGCTCTTCCTGGCGTCCGCCGCGGCGGCCGCGCGCGTGGTGCTCGGCGC
GGAGCTGGAGCCGCAGTTCGACCGGCCCTACCTCGCCACGTCGCTCGCCGACTTCTGGGGGCGGAGGTGGAACCTCATGG
TCCCCGCCGTGCTCCGCCCGAGCGTGTACCTCCCCGTGCGCGCCCGCCACGGCGCCGCGGCGGGCGTGGCCGCGGCGTTC
CTCGTGTCGGGGCTCATGCACGAGGTGCTGTTCTACTACATCACCCTCGACCCGGGCTGCACCACGGGCGAGGTGACCGC
GTTCTTCGCGCTCCACGGCGCGTGCGTGGTGGCGGAGCGGTGGTGGCTGGAAGAAGCTCGTCGTCGCGCGTGGAGGTGGA
GGGCGCCGCGGCGGGCGGTGGCGACGGCGATGACGCTGGCGTTCGTGACGGGGACGGGGTCGTGGCTGTTCTTCGCGCCG
GTGACGCGGAGCGGGCTGGACAAGGCCATCGTGGCGGAGTGCGAGGGGTTCATGGCCTTCTTGGAAGAGGCCGGGTGGAA
G

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.28764.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis