Browse Element(s) Details


Os.32504.1.S1_at

Description gb:AK072540.1
DB_XREF= gi:32982563
TID=Os.32504.1
CNT=2
FEA=FLmRNA
TIER=FL
STK=2
UG=Os.32504 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) putative dimethylaniline monooxygenase (OJ1118_G09.5), mRNA
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J023132I08, full insert sequence.
FL= gb:AK103996.1 gb:AK072540.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os07g0210011/11Flavin-binding monooxygenase-like family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os07g02070Os.47130.4.A1_x_at5/117+644519..646561retrotransposon protein, putative, unclassified
LOC_Os07g02080NANA7+655468..655809hypothetical protein
LOC_Os07g02090Os.25566.1.S1_at11/117+657076..661498calcineurin-like phosphoesterase family protein, putative, expressed
LOC_Os07g02100Os.32504.2.S1_at11/117+662917..665400Flavin-binding monooxygenase-like family protein, expressed
LOC_Os07g02100Os.32504.1.S1_at11/117+662917..665400Flavin-binding monooxygenase-like family protein, expressed
LOC_Os07g02110OsAffx.28228.1.S1_x_at11/117+666043..667680expressed protein
LOC_Os07g02120NANA7+671472..673066Flavin-binding monooxygenase-like family protein, expressed
LOC_Os07g02130NANA7+675800..677206flavin-containing monooxygenase family protein, putative
LOC_Os07g02140OsAffx.16039.1.S1_at11/117+683770..685521Flavin-binding monooxygenase-like family protein, expressed
LOC_Os07g02150OsAffx.28229.1.S1_x_at8/117+686363..6868423'-5' exonuclease family protein
LOC_Os07g02170OsAffx.28231.1.S1_x_at11/117+690169..6909123'-5' exonuclease domain-containing protein, putative
LOC_Os07g02170OsAffx.28231.1.S1_at11/117+690169..6909123'-5' exonuclease domain-containing protein, putative

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Gene Ontology Classification
GO idTypeName
GO:0006118biological_processelectron transport
GO:0004497molecular_functionmonooxygenase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.32504.1.S1_at--271--5311Chr07:664174..664198 (25 bp)
GAAGGAGATCTTTGTGTCATCCCTC
LOC_Os07g02100
Os.32504.1.S1_at--760--1271Chr07:664179..664203 (25 bp)
AGATCTTTGTGTCATCCCTCTCCGA
LOC_Os07g02100
Os.32504.1.S1_at--400--8091Chr07:664275..664299 (25 bp)
GGCACGGTTGGACTCCCGCCGAGGA
LOC_Os07g02100
Os.32504.1.S1_at--572--5771Chr07:664304..664328 (25 bp)
GACGACGCCCACAAATAAAAGCACT
LOC_Os07g02100
Os.32504.1.S1_at--979--2411Chr07:664320..664344 (25 bp)
AAAAGCACTTGGATTGGACTCCAAT
LOC_Os07g02100
Os.32504.1.S1_at--614--11Chr07:664332..664356 (25 bp)
ATTGGACTCCAATAAATTCAGGTTA
LOC_Os07g02100
Os.32504.1.S1_at--770--2411Chr07:664397..664421 (25 bp)
AAAAATGCTGGCCTGTCTGTCTCAA
LOC_Os07g02100
Os.32504.1.S1_at--1046--3011Chr07:664400..664424 (25 bp)
AATGCTGGCCTGTCTGTCTCAAGAG
LOC_Os07g02100
Os.32504.1.S1_at--186--8431Chr07:664406..664430 (25 bp)
GGCCTGTCTGTCTCAAGAGGATTTT
LOC_Os07g02100
Os.32504.1.S1_at--873--8211Chr07:664464..664488 (25 bp)
GGAATTGCTATAAATATGCCGCCAT
LOC_Os07g02100
Os.32504.1.S1_at--773--9071Chr07:664469..664493 (25 bp)
TGCTATAAATATGCCGCCATCTTTC
LOC_Os07g02100
Target Sequence 
GAAGGAGATCTTTGTGTCATCCCTCTCCGACATGGTCGACGACATCGAGAACTTCCGCGACGGCTACCACGACAGCGACC
TCGTCCGCGACGCCCTGCGCCGGCACGGTTGGACTCCCGCCGAGGAGGACGACGACGCCCACAAATAAAAGCACTTGGAT
TGGACTCCAATAAATTCAGGTTAAGATGAAGCAAACCAAATAAATACACGACAATTCAACAAAAAAAATGCTGGCCTGTC
TGTCTCAAGAGGATTTTTCATTGTACTAAAAACTGAACCTTTTTATTTTCGGAATTGCTATAAATATGCCGCCATCTTTC

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.32504.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis