Browse Element(s) Details


Os.36218.1.S1_at

Description gb:AK064151.1
DB_XREF= gi:32974169
TID=Os.36218.1
CNT=4
FEA=FLmRNA
TIER=FL
STK=0
UG=Os.36218 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) glucuronosyl transferase-like protein (P0418E08.14), mRNA
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E05, full insert sequence.
FL= gb:AK064151.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os07g1381010/11UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os07g13750OsAffx.16111.1.S1_at1/117+7884765..7891981retrotransposon protein, putative, unclassified
LOC_Os07g13750OsAffx.11259.1.S1_at1/117+7884765..7891981retrotransposon protein, putative, unclassified
LOC_Os07g13750OsAffx.22699.1.S1_x_at1/117+7884765..7891981retrotransposon protein, putative, unclassified
LOC_Os07g13760NANA7+7892947..7895506hypothetical protein
LOC_Os07g13770Os.14631.1.S1_at11/117+7898877..7900719UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13780NANA7+7902088..7902684Cytokinin-N-glucosyltransferase 1, putative, expressed
LOC_Os07g13790OsAffx.5320.1.S1_at10/117+7902982..7904224hypothetical protein
LOC_Os07g13800OsAffx.16247.1.S1_at11/117+7905788..7907712UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13810Os.36218.2.S1_x_at11/117+7910258..7912076UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13810Os.36218.1.S1_at10/117+7910258..7912076UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13810OsAffx.5324.1.S1_x_at2/117+7910258..7912076UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13830Os.31430.1.S1_at11/117+7917666..7919483expressed protein
LOC_Os07g13840OsAffx.28433.1.S1_s_at11/117+7923924..7924856hypothetical protein
LOC_Os07g13840OsAffx.9066.1.S1_x_at1/117+7923924..7924856hypothetical protein
LOC_Os07g13850OsAffx.25936.7.S1_s_at11/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.1.S1_s_at11/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.5.S1_x_at11/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.2.S1_x_at5/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.1.S1_at1/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13860Os.10827.1.S1_x_at4/117+7932428..7936008transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13860Os.46055.2.S1_x_at3/117+7932428..7936008transposon protein, putative, CACTA, En/Spm sub-class

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.36218.1.S1_at--604--211Chr07:7911789..7911813 (25 bp)
ATTTGTTCGCTGTGAACTGCTCGTT
LOC_Os07g13810
Os.36218.1.S1_at--20--4811Chr07:7911807..7911831 (25 bp)
GCTCGTTGTAGCATATCAAGTCTTC
LOC_Os07g13810
Os.36218.1.S1_at--281--10451Chr07:7911838..7911862 (25 bp)
TTAGTACTCCTGTCTCTTCATGTTA
LOC_Os07g13810
Os.36218.1.S1_at--670--3511Chr07:7911856..7911880 (25 bp)
CATGTTATCTCAATATCTGCTGTAA
LOC_Os07g13810
Os.36218.1.S1_at--960--3111Chr07:7911880..7911904 (25 bp)
AATTTGTAGCCGAATTGTAACTGGC
LOC_Os07g13810
Os.36218.1.S1_at--171--671Chr07:7911917..7911941 (25 bp)
ATGAACTCTTGGAAATCTTTGATGT
LOC_Os07g13810
Os.36218.1.S1_at--1109--1252Chr07:7911945..7911969 (25 bp)
AGATTTCAGTGGGATCACTCAACTG
LOC_Os07g13810
Os.36218.1.S1_at--730--2012Chr07:7911961..7911985 (25 bp)
ACTCAACTGAAGTGTTCTGTCCAAA
LOC_Os07g13810
Os.36218.1.S1_at--186--6692Chr07:7912001..7912025 (25 bp)
GTTCTTTTCTGATGGTTTTAGTCCT
LOC_Os07g13810
Os.36218.1.S1_at--329--10451Chr07:7912018..7912042 (25 bp)
TTAGTCCTGTTTTCGCTGTTATATG
LOC_Os07g13810
Os.36218.1.S1_at--791--7891NONE
GGTTCTACTACCAAACTATGTGCAC
NONE
Target Sequence 
ATTTGTTCGCTGTGAACTGCTCGTTGTAGCATATCAAGTCTTCAGATAATTAGTACTCCTGTCTCTTCATGTTATCTCAA
TATCTGCTGTAAATTTGTAGCCGAATTGTAACTGGCAANCTTCTGTTGATGAACTCTTGGAAATCTTTGATGTATAAGAT
TTCAGTGGGATCACTCAACTGAAGTGTTCTGTCCAAACTTTATNCAAGTTATGTTCTTTTCTGATGGTTTTAGTCCTGTT
TTCGCTGTTATATGAACTTGATGGTTCTACTACCAAACTATGTGCAC

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.36218.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis