Browse Element(s) Details


Os.36218.2.S1_x_at

Description gb:NM_186799.1
DB_XREF= gi:34900683
GEN=P0418E08.14
TID=Os.36218.2
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.36218 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) glucuronosyl transferase-like protein (P0418E08.14), mRNA
DEF=Oryza sativa (japonica cultivar-group) glucuronosyl transferase-like protein (P0418E08.14), mRNA.
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os07g1381011/11UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g139403/11Cytokinin-N-glucosyltransferase 1, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os07g13750OsAffx.16111.1.S1_at1/117+7884765..7891981retrotransposon protein, putative, unclassified
LOC_Os07g13750OsAffx.11259.1.S1_at1/117+7884765..7891981retrotransposon protein, putative, unclassified
LOC_Os07g13750OsAffx.22699.1.S1_x_at1/117+7884765..7891981retrotransposon protein, putative, unclassified
LOC_Os07g13760NANA7+7892947..7895506hypothetical protein
LOC_Os07g13770Os.14631.1.S1_at11/117+7898877..7900719UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13780NANA7+7902088..7902684Cytokinin-N-glucosyltransferase 1, putative, expressed
LOC_Os07g13790OsAffx.5320.1.S1_at10/117+7902982..7904224hypothetical protein
LOC_Os07g13800OsAffx.16247.1.S1_at11/117+7905788..7907712UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13810Os.36218.2.S1_x_at11/117+7910258..7912076UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13810Os.36218.1.S1_at10/117+7910258..7912076UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13810OsAffx.5324.1.S1_x_at2/117+7910258..7912076UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os07g13830Os.31430.1.S1_at11/117+7917666..7919483expressed protein
LOC_Os07g13840OsAffx.28433.1.S1_s_at11/117+7923924..7924856hypothetical protein
LOC_Os07g13840OsAffx.9066.1.S1_x_at1/117+7923924..7924856hypothetical protein
LOC_Os07g13850OsAffx.25936.7.S1_s_at11/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.1.S1_s_at11/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.5.S1_x_at11/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.2.S1_x_at5/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13850OsAffx.25936.1.S1_at1/117+7925239..7928754transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13860Os.10827.1.S1_x_at4/117+7932428..7936008transposon protein, putative, CACTA, En/Spm sub-class
LOC_Os07g13860Os.46055.2.S1_x_at3/117+7932428..7936008transposon protein, putative, CACTA, En/Spm sub-class

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.36218.2.S1_x_at--1040--4152Chr07:7911259..7911283 (25 bp)
CGCCGCGCTCCGTGCTGTACGTGAG
LOC_Os07g13810
Os.36218.2.S1_x_at--937--7631Chr07:7911288..7911312 (25 bp)
GGGAGCGTCGCCTGCATCGACCACG
LOC_Os07g13810
Os.36218.2.S1_x_at--88--531Chr07:7911303..7911327 (25 bp)
ATCGACCACGACATGTTCGACGAAA
LOC_Os07g13810
Os.36218.2.S1_x_at--515--7251Chr07:7911387..7911411 (25 bp)
GTCCGCGGCTGTATGCCAGCGCTAC
LOC_Os07g13810
Os.36218.2.S1_x_at--344--2811Chr07:7911438..7911462 (25 bp)
AAGATCGTGCCATGGGCGCCGCAGA
LOC_Os07g13810
Os.36218.2.S1_x_at--742--4431Chr07:7911483..7911507 (25 bp)
GCCATCGGCGGGTTCTGGACGCACT
LOC_Os07g13810
Os.36218.2.S1_x_at--339--10652Chr07:7911570..7911594 (25 bp)
TTCGCCGACCAGACGGTGAACGCGA
LOC_Os07g13810
Os.36218.2.S1_x_at--732--2592Chr07:7911588..7911612 (25 bp)
AACGCGAGGTACGTGACGCACCAGT
LOC_Os07g13810
Os.36218.2.S1_x_at--1077--7631Chr07:7911709..7911733 (25 bp)
GGGAGACAGCGCGTCGCCTGAAAAT
LOC_Os07g13810
Os.36218.2.S1_x_at--769--5511Chr07:7911728..7911752 (25 bp)
GAAAATCCAGGCGAATCAATGCGTC
LOC_Os07g13810
Os.36218.2.S1_x_at--741--4111Chr07:7911739..7911763 (25 bp)
CGAATCAATGCGTCGCTGCGACTCT
LOC_Os07g13810
Target Sequence 
CGCCGCGCTCCGTGCTGTACGTGAGCCTGGGGAGCGTCGCCTGCATCGACCACGACATGTTCGACGAAATGGCGTGGGGT
CTCGCCGCCAGCGGCGTGCCGTTCCTCTGGGTCAACCGGCCCGGCTCCGTCCGCGGCTGTATGCCAGCGCTACCCTACGG
GGTCGACGTGAGCAGGGGCAAGATCGTGCCATGGGCGCCGCAGAGGGACGTCCTGGCGCACCCGGCCATCGGCGGGTTCT
GGACGCACTGCGGGTGGAACTCGACGCTGGAGAGCGTCTGTGAGGGGGTGCCCATGCTCGCGCGGCCGTGCTTCGCCGAC
CAGACGGTGAACGCGAGGTACGTGACGCACCAGTGGGGCGTCGGGCTGGAGCTCGGCGAGGTGTTCGACCGGGACCGCGT
CGCCGTGGCGGTGAGGAAGCTGATGGTTGGGGAAGAAGGCGCCGCGATGAGGGAGACAGCGCGTCGCCTGAAAATCCAGG
CGAATCAATGCGTCGCTGCGACTCT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.36218.2.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis