Browse Element(s) Details


Os.37007.2.S1_at

Description gb:NM_192640.1
DB_XREF= gi:34912363
GEN=P0518F01.18
TID=Os.37007.2
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.37007 (NCBI UniGene Cluster)
DEF=Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (P0518F01.18), mRNA.
PROD=putative receptor-like protein kinase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g4173011/11Protein kinase domain containing protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g41690NANA1+23921898..23928066transposon protein, putative, unclassified
LOC_Os01g41700NANA1+23928701..23931934transposon protein, putative, unclassified
LOC_Os01g41710Os.7941.2.S1_s_at11/111+23934211..23935404Chlorophyll a-b binding protein 2, chloroplast precursor, putative, expressed
LOC_Os01g41710Os.7941.2.S1_a_at11/111+23934211..23935404Chlorophyll a-b binding protein 2, chloroplast precursor, putative, expressed
LOC_Os01g41720OsAffx.9161.2.S1_at11/111+23937907..23942105expressed protein
LOC_Os01g41720OsAffx.9161.1.S1_x_at8/111+23937907..23942105expressed protein
LOC_Os01g41720Os.46481.2.S1_x_at1/111+23937907..23942105expressed protein
LOC_Os01g41720Os.26986.1.A1_at1/111+23937907..23942105expressed protein
LOC_Os01g41730Os.37007.1.S1_at11/111+23951137..23953867Protein kinase domain containing protein, expressed
LOC_Os01g41730Os.37007.2.S1_at11/111+23951137..23953867Protein kinase domain containing protein, expressed
LOC_Os01g41740OsAffx.23625.1.S1_at11/111+23957292..23958085hypothetical protein
LOC_Os01g41750Os.24878.1.A1_at11/111+23958615..23962223Leucine Rich Repeat family protein, expressed
LOC_Os01g41760NANA1+23964090..23964416hypothetical protein
LOC_Os01g41770OsAffx.21394.1.S1_at11/111+23966834..23969695Leucine Rich Repeat family protein, expressed
LOC_Os01g41780Os.40423.2.S1_x_at11/111+23975277..23978326Leucine Rich Repeat family protein, expressed
LOC_Os01g41780Os.40423.1.S1_at10/111+23975277..23978326Leucine Rich Repeat family protein, expressed

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Gene Ontology Classification
GO idTypeName
GO:0016301molecular_functionkinase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.37007.2.S1_at--273--8011Chr01:23953451..23953551 (25 bp)
GGAGGCCGATGATTACAACCATTTT
LOC_Os01g41730
Os.37007.2.S1_at--513--6551Chr01:23953540..23953561 (22 bp)
GATTACAACCATTTTGTCGCCGTCG
LOC_Os01g41730
Os.37007.2.S1_at--174--10471Chr01:23953540..23953563 (24 bp)
TTACAACCATTTTGTCGCCGTCGGT
LOC_Os01g41730
Os.37007.2.S1_at--619--7191Chr01:23953558..23953582 (25 bp)
GTCGGTGTCGATGCTGAACGCCTGA
LOC_Os01g41730
Os.37007.2.S1_at--416--7451Chr01:23953562..23953586 (25 bp)
GTGTCGATGCTGAACGCCTGAACCA
LOC_Os01g41730
Os.37007.2.S1_at--1084--8971Chr01:23953572..23953596 (25 bp)
TGAACGCCTGAACCACCTGAAGTTT
LOC_Os01g41730
Os.37007.2.S1_at--491--4471Chr01:23953577..23953601 (25 bp)
GCCTGAACCACCTGAAGTTTTTGTA
LOC_Os01g41730
Os.37007.2.S1_at--355--3371Chr01:23953585..23953609 (25 bp)
CACCTGAAGTTTTTGTATGCGCTCT
LOC_Os01g41730
Os.37007.2.S1_at--540--2831Chr01:23953591..23953615 (25 bp)
AAGTTTTTGTATGCGCTCTTGCTCA
LOC_Os01g41730
Os.37007.2.S1_at--893--10251Chr01:23953596..23953620 (25 bp)
TTTGTATGCGCTCTTGCTCAAGGAT
LOC_Os01g41730
Os.37007.2.S1_at--454--4571Chr01:23953603..23953627 (25 bp)
GCGCTCTTGCTCAAGGATCGGAGGA
LOC_Os01g41730
Target Sequence 
GGAGGCCGATGATTACAACCATTTTGTCGCCGTCGGTGTCGATGCTGAACGCCTGAACCACCTGAAGTTTTTGTATGCGC
TCTTGCTCAAGGATCGGAGGA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.37007.2.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis