Browse Element(s) Details


Os.51664.1.S1_at

Description gb:AK063324.1
DB_XREF= gi:32973342
TID=Os.51664.1
CNT=1
FEA=FLmRNA
TIER=FL
STK=1
UG=Os.51664 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) cDNA clone:001-113-H05, full insert sequence
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H05, full insert sequence.
FL= gb:AK063324.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os06g1172011/11UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os06g11660Os.37006.1.S1_at6/116+6179336..6180477Phosphate-induced protein 1 conserved region containing protein, expressed
LOC_Os06g11670OsAffx.4801.1.S1_at11/116+6188102..6188359hypothetical protein
LOC_Os06g11680OsAffx.27569.1.S1_at11/116+6190532..6191497Phosphate-induced protein 1 conserved region containing protein
LOC_Os06g11690OsAffx.27570.1.S1_at11/116+6196207..6196577hypothetical protein
LOC_Os06g11700OsAffx.15374.1.S1_s_at11/116+6198475..6199739Phosphate-induced protein 1 conserved region containing protein, expressed
LOC_Os06g11710OsAffx.27571.1.S1_at11/116+6201141..6201791Cytokinin-O-glucosyltransferase 2, putative
LOC_Os06g11720Os.51664.1.S1_at11/116+6204614..6206558UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
LOC_Os06g11730Os.12968.1.S1_at11/116+6207297..6213435RNA recognition motif family protein, expressed
LOC_Os06g11740Os.23073.1.S1_at11/116+6221593..6223682adenosine 5'-phosphosulfate reductase 3, putative, expressed
LOC_Os06g11750OsAffx.15375.1.S1_at9/116+6226814..6228558hypothetical protein

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.51664.1.S1_at--114--1171Chr06:6206014..6206038 (25 bp)
AGTACATCAACTCGCGGTACGTGCG
LOC_Os06g11720
Os.51664.1.S1_at--1143--5571Chr06:6206151..6206175 (25 bp)
GAAATGAGGCGCAACGCCGCCAGGT
LOC_Os06g11720
Os.51664.1.S1_at--890--7371Chr06:6206264..6206288 (25 bp)
GTGACGACATGGCACACACGCGTAC
LOC_Os06g11720
Os.51664.1.S1_at--141--3551Chr06:6206293..6206317 (25 bp)
CATCGTCGTGACAAGTTCGGCAGTT
LOC_Os06g11720
Os.51664.1.S1_at--109--2231Chr06:6206303..6206327 (25 bp)
ACAAGTTCGGCAGTTCGGCTGGCTG
LOC_Os06g11720
Os.51664.1.S1_at--260--3751Chr06:6206329..6206353 (25 bp)
CTCACTCATCGGACGCATGTGCAAA
LOC_Os06g11720
Os.51664.1.S1_at--336--651Chr06:6206354..6206378 (25 bp)
ATGCACTTTGGATGTTTCTCCTTTT
LOC_Os06g11720
Os.51664.1.S1_at--514--3631Chr06:6206406..6206430 (25 bp)
CTTGCAGTTGCAGAGTCGCAGTTGT
LOC_Os06g11720
Os.51664.1.S1_at--277--6111Chr06:6206418..6206442 (25 bp)
GAGTCGCAGTTGTTCAGTTCTTATC
LOC_Os06g11720
Os.51664.1.S1_at--166--9651Chr06:6206431..6206455 (25 bp)
TCAGTTCTTATCTGGTTCTTGGATA
LOC_Os06g11720
Os.51664.1.S1_at--735--4671Chr06:6206480..6206504 (25 bp)
GCGGTACAACGTTTTCTTAATGCAG
LOC_Os06g11720
Target Sequence 
AGTACATCAACTCGCGGTACGTGCGCGACGAGTGGGGCATCGGGCTCCGCCTCGACGAGGAGCTCCGCCGCGAGCAGGTC
GCCGCCCACGTCGAGAAGCTCATGGGAGGCGGCGGCGGCGGCGGCGACAGGGGCAAGGAAATGAGGCGCAACGCCGCCAG
GTGGAAGGCGGCGGCGGAGGCGGCGACGGCGAAGGGCGGCTCGTCGTACGGCGGCCTCGACAAGCTGGTCGAGCAGCTGC
GGCTGGGTCAGTGACGACATGGCACACACGCGTACACGTCATCGTCGTGACAAGTTCGGCAGTTCGGCTGGCTGGCTCAC
TCATCGGACGCATGTGCAAAATGCACTTTGGATGTTTCTCCTTTTCTTTTTTTTTTCTTCTTCTTTTCATTTCTTGCAGT
TGCAGAGTCGCAGTTGTTCAGTTCTTATCTGGTTCTTGGATATGATTTTTAGCGACAGGAGTGATAGCGGTACAACGTTT
TCTTAATGCAG

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.51664.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis