Browse Element(s) Details


OsAffx.29583.2.S1_x_at

Description tigr:9636.m03837
TID=OsAffx.29583.2
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=Similar to At1g73880
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os08g3813011/11Cytokinin-O-glucosyltransferase 3, putative
LOC_Os08g381602/11UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os08g38092Os.56236.1.S1_at11/118+23997086..24001873expressed protein
LOC_Os08g38092OsAffx.9699.2.A1_at1/118+23997086..24001873expressed protein
LOC_Os08g38100OsAffx.6063.1.S1_at11/118+24004427..24005539expressed protein
LOC_Os08g38110NANA8+24010387..24011853UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os08g38120OsAffx.17399.3.S1_at11/118+24023969..24024706expressed protein
LOC_Os08g38130OsAffx.29583.2.S1_x_at11/118+24025733..24027009Cytokinin-O-glucosyltransferase 3, putative
LOC_Os08g38140OsAffx.17394.1.S1_at11/118+24028007..24028713expressed protein
LOC_Os08g38150Os.50889.1.S1_at2/118+24029333..24033190hypothetical protein
LOC_Os08g38150OsAffx.30891.1.S1_x_at1/118+24029333..24033190hypothetical protein
LOC_Os08g38150Os.27101.1.S1_at1/118+24029333..24033190hypothetical protein
LOC_Os08g38160OsAffx.29583.2.S1_x_at2/118+24034944..24036335UDP-glucoronosyl and UDP-glucosyl transferase family protein, expressed

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.29583.2.S1_x_at--554--8711Chr08:24026299..24026323 (25 bp)
TGTCCCTCGCGTTCGGTGGTCTATG
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--820--7491Chr08:24026284..24026308 (25 bp)
GTGGTCTATGTCTGCTTCGGGAGCA
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--230--672Chr08:24035201..24035225 (25 bp)
ATGAAGGCCGACCAGTTCATCGACG
LOC_Os08g38160
OsAffx.29583.2.S1_x_at--489--1832Chr08:24025968..24025992 (25 bp)
ACGCGCGGCTCGTGGTCGACCTGCA
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--25--4571Chr08:24025941..24025965 (25 bp)
GCGCCGGTGTGCGTGCCGCGGATGG
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--254--791Chr08:24025842..24025866 (25 bp)
ATGTGAGGGCCAAGACCAGCGAGCT
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--383--8671Chr08:24025841..24025865 (25 bp)
TGTGAGGGCCAAGACCAGCGAGCTC
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--645--8891Chr08:24025839..24025863 (25 bp)
TGAGGGCCAAGACCAGCGAGCTCGC
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--323--7731Chr08:24025786..24025810 (25 bp)
GGTGGCAGCTCGTGGATCGCGATGG
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--844--8251Chr08:24025783..24025807 (25 bp)
GGCAGCTCGTGGATCGCGATGGAGA
LOC_Os08g38130
OsAffx.29583.2.S1_x_at--1161--8051Chr08:24025763..24025787 (25 bp)
GGAGAAGATGGCGAATGAGCTGGAA
LOC_Os08g38130
Target Sequence 
TGTCCCTCGCGTTCGGTGGTCTATGTCTGCTTCGGGAGCATGTACAAGCCGCCGCCGGCCCAGGCGGCGGCGCTGGGCGC
CGCGCTGGAGGCGAGCGGCGCGCGGTTCGTCTGGGAGGTGGGCGCGGACGCCGCCGTGGTGCCGGAGGGGCTGGAGGAGA
GGACGGCCGCGCGTGGCCGCGTCGTGCGCGGCTGGGCGCCGCAGATGGAGATCCTCCGGCACGCCGCCGTGGGCGCGTTC
CTGACGCACTGCGGCTGGAACTCGACGCTCGAGGGCGTCGCCGCCGGGGTGCCGCTCCTCGCCTGGCCGATGAAGGCCGA
CCAGTTCATCGACGCGCGGCTCGTGGTCGACCTGCACGGCGCCGGTGTGCGTGCCGCGGATGGCGCGGGCGCTGTGCCCT
ACCCGGGGGCGCTCGCGCGCGTGTTCGCCGACGCCGCGGACGCCGGGAAGCTGGCGGATGTGAGGGCCAAGACCAGCGAG
CTCGCCGCGGCCGCCGCGGCGGCGGTGGAGGAAGGTGGCAGCTCGTGGATCGCGATGGAGAAGATGGCGAATGAGCTGGA
A

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.29583.2.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis