Description |
gb:AY341857.1 DB_XREF=
gi:33519201
TID=Os.29987.1 CNT=2 FEA=FLmRNA TIER=FL STK=1
UG=Os.29987 (NCBI UniGene Cluster) DEF=Oryza sativa (japonica cultivar-group) WRKY17 mRNA, complete cds. PROD=WRKY17 FL=
gb:AY341857.1 REP_ORG=O. sativa |
Associated TIGR Gene Locus | TIGR Locus | Matching Probes | Description |
---|
LOC_Os05g50610 | 11/11 | retrotransposon protein, putative, Ty3-gypsy subclass, expressed | LOC_Os03g60524 | 6/11 | transposon protein, putative, unclassified | LOC_Os01g06780 | 5/11 | retrotransposon protein, putative, Ty3-gypsy subclass | LOC_Os07g09930 | 5/11 | transposon protein, putative, unclassified | LOC_Os07g03440 | 4/11 | transposon protein, putative, CACTA, En/Spm sub-class | LOC_Os07g03570 | 4/11 | transposon protein, putative, unclassified | LOC_Os07g03550 | 4/11 | transposon protein, putative, unclassified | LOC_Os07g03350 | 4/11 | transposon protein, putative, CACTA, En/Spm sub-class | LOC_Os11g02490 | 3/11 | retrotransposon protein, putative, Ty3-gypsy subclass | LOC_Os12g37310 | 2/11 | retrotransposon protein, putative, Ty3-gypsy subclass | LOC_Os01g59280 | 2/11 | transposon protein, putative, unclassified | LOC_Os04g46690 | 1/11 | hAT family dimerisation domain containing protein | LOC_Os03g15310 | 1/11 | transposon protein, putative, unclassified |
|
Gene Context (flanking 25kb) |
|
Gene Ontology Classification | GO id | Type | Name |
---|
GO:0003677 | molecular_function | DNA binding |
|
Probe Info |
|
Target Sequence | CAGACCAACAACAGGAATCGGTTCTTAAGTGCGAGAGCGGGAAAACCGTACACCCGGCTCAAGATGTTCAAAGGTGGCTT
GCCTTGCTCGAGATCTGGAGCTTGATCCTCGAAATCCTCGCACTGCGGGTCTTCGGGCTCCGGAACTACACGCGAAACGG
GACAACT BLASTn GenBank NR |
Expression Profiles | Gene Chronologer Gene Chronologer (Grouped) Heterosis View Gene Correlator (coexpression analysis) SALK RiceGE Rice MPSS RiceArray Coexpression Database |
Miscellaneous | SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project: Putative homologies in ricePutative homologies in arabidopsis |