Browse Element(s) Details


Os.36919.1.S1_at

Description gb:AK062368.1
DB_XREF= gi:32972386
TID=Os.36919.1
CNT=1
FEA=FLmRNA
TIER=FL
STK=1
UG=Os.36919 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) P0506B12.29 (P0506B12.29), mRNA
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:001-102-A01, full insert sequence.
FL= gb:AK062368.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g6201011/11Monoglyceride lipase, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g61960OsAffx.23888.1.S1_at11/111+36195770..36196597hypothetical protein
LOC_Os01g61970Os.6681.1.S1_at10/111+36197920..36200047Lung seven transmembrane receptor family protein, expressed
LOC_Os01g61980Os.6795.1.S1_at11/111+36207873..36209261expressed protein
LOC_Os01g61990Os.16933.1.S1_at10/111+36211621..36215258ankyrin repeat family protein, putative, expressed
LOC_Os01g62000OsAffx.11689.1.S1_s_at11/111+36216652..36218214Pectate lyase family protein
LOC_Os01g62010Os.36919.2.S1_s_at11/111+36220130..36222021Monoglyceride lipase, putative, expressed
LOC_Os01g62010Os.36919.1.S1_at11/111+36220130..36222021Monoglyceride lipase, putative, expressed
LOC_Os01g62010Os.36919.1.S1_x_at11/111+36220130..36222021Monoglyceride lipase, putative, expressed
LOC_Os01g62020Os.9835.2.S1_at11/111+36223875..36227429UDP-D-glucuronate decarboxylase, putative, expressed
LOC_Os01g62020Os.9835.1.S1_a_at11/111+36223875..36227429UDP-D-glucuronate decarboxylase, putative, expressed
LOC_Os01g62020OsAffx.11691.1.S1_at11/111+36223875..36227429UDP-D-glucuronate decarboxylase, putative, expressed
LOC_Os01g62030OsAffx.9560.1.S1_at11/111+36227584..36228075disease resistance-responsive family protein, putative
LOC_Os01g62040Os.38033.3.S1_at11/111+36229821..36235174RuvB-like 1, putative, expressed
LOC_Os01g62040Os.38033.3.S1_x_at11/111+36229821..36235174RuvB-like 1, putative, expressed
LOC_Os01g62040Os.38033.1.S1_at11/111+36229821..36235174RuvB-like 1, putative, expressed
LOC_Os01g62040Os.38033.2.S1_at11/111+36229821..36235174RuvB-like 1, putative, expressed
LOC_Os01g62050OsAffx.21763.2.S1_s_at11/111+36235334..36235956hypothetical protein
LOC_Os01g62050OsAffx.21763.2.S1_at10/111+36235334..36235956hypothetical protein
LOC_Os01g62050OsAffx.21763.1.S1_at2/111+36235334..36235956hypothetical protein
LOC_Os01g62060Os.30998.1.S1_at11/111+36238933..36240170uncharacterized plant-specific domain TIGR01589 family protein, expressed
LOC_Os01g62070Os.10121.1.S1_at11/111+36243599..36248818cation efflux family protein, expressed
LOC_Os01g62070Os.42490.1.S1_x_at10/111+36243599..36248818cation efflux family protein, expressed
LOC_Os01g62070Os.42490.1.S1_at10/111+36243599..36248818cation efflux family protein, expressed

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Gene Ontology Classification
GO idTypeName
GO:0003824molecular_functioncatalytic activity
GO:0016787molecular_functionhydrolase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.36919.1.S1_at--313--4271Chr01:36221915..36221939 (25 bp)
CCTGAAACTTTCTGAGAGATGTCAA
LOC_Os01g62010
Os.36919.1.S1_at--1106--3851Chr01:36221926..36221950 (25 bp)
CTGAGAGATGTCAATCATGTGCCAT
LOC_Os01g62010
Os.36919.1.S1_at--633--6031Chr01:36221930..36221954 (25 bp)
GAGATGTCAATCATGTGCCATTGCA
LOC_Os01g62010
Os.36919.1.S1_at--1060--8731Chr01:36221934..36221958 (25 bp)
TGTCAATCATGTGCCATTGCAGTTT
LOC_Os01g62010
Os.36919.1.S1_at--116--4451Chr01:36221946..36221970 (25 bp)
GCCATTGCAGTTTCCCTGTGCTTGT
LOC_Os01g62010
Os.36919.1.S1_at--1132--10291Chr01:36221956..36221980 (25 bp)
TTTCCCTGTGCTTGTCCGCTGTAAA
LOC_Os01g62010
Os.36919.1.S1_at--324--8671Chr01:36221962..36221986 (25 bp)
TGTGCTTGTCCGCTGTAAATTTGTC
LOC_Os01g62010
Os.36919.1.S1_at--805--4931Chr01:36221965..36221989 (25 bp)
GCTTGTCCGCTGTAAATTTGTCCTA
LOC_Os01g62010
Os.36919.1.S1_at--705--7231Chr01:36221969..36221993 (25 bp)
GTCCGCTGTAAATTTGTCCTACCGA
LOC_Os01g62010
Os.36919.1.S1_at--132--10231Chr01:36221981..36222005 (25 bp)
TTTGTCCTACCGAAAACGATATACT
LOC_Os01g62010
Os.36919.1.S1_at--1047--9931Chr01:36221988..36222012 (25 bp)
TACCGAAAACGATATACTGAAACTT
LOC_Os01g62010
Target Sequence 
CCTGAAACTTTCTGAGAGATGTCAATCATGTGCCATTGCAGTTTCCCTGTGCTTGTCCGCTGTAAATTTGTCCTACCGAA
AACGATATACTGAAACTT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.36919.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis