Browse Element(s) Details


Os.7392.2.S1_x_at

Description gb:NM_190600.1
DB_XREF= gi:34908283
GEN=P0005H10.14
TID=Os.7392.2
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.7392 (NCBI UniGene Cluster)
DEF=Oryza sativa (japonica cultivar-group) putative aldose reductase (P0005H10.14), mRNA.
PROD=putative aldose reductase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g6288011/11oxidoreductase, aldo/keto reductase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g62840Os.14234.1.S1_at11/111+36722335..36725034mannose-1-phosphate guanyltransferase, putative, expressed
LOC_Os01g62850Os.19137.1.S1_at11/111+36725833..36728556integral membrane protein, putative, expressed
LOC_Os01g62860Os.42436.1.S1_at11/111+36730314..36734228oxidoreductase, aldo/keto reductase family protein, expressed
LOC_Os01g62870Os.5560.1.S1_at11/111+36737563..36741458oxidoreductase, aldo/keto reductase family protein, expressed
LOC_Os01g62880Os.7392.2.S1_x_at11/111+36744963..36746878oxidoreductase, aldo/keto reductase family protein, expressed
LOC_Os01g62890Os.49468.2.S1_at11/111+36746876..36749715prenylated rab acceptor, putative, expressed
LOC_Os01g62890OsAffx.21738.1.S1_at11/111+36746876..36749715prenylated rab acceptor, putative, expressed
LOC_Os01g62890Os.49468.2.S1_x_at11/111+36746876..36749715prenylated rab acceptor, putative, expressed
LOC_Os01g62890OsAffx.21738.1.S1_x_at10/111+36746876..36749715prenylated rab acceptor, putative, expressed
LOC_Os01g62900Os.33244.1.S2_at11/111+36757827..36767692Delta 1-pyrroline-5-carboxylate synthetase, putative, expressed
LOC_Os01g62900Os.33244.1.S1_at11/111+36757827..36767692Delta 1-pyrroline-5-carboxylate synthetase, putative, expressed
LOC_Os01g62900Os.10728.1.S1_at1/111+36757827..36767692Delta 1-pyrroline-5-carboxylate synthetase, putative, expressed
LOC_Os01g62910Os.42431.1.S1_at11/111+36765797..36769793pentatricopeptide, putative, expressed

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Gene Ontology Classification
GO idTypeName
NONENONENONE
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.7392.2.S1_x_at--381--6571Chr01:36745878..36745902 (25 bp)
GATTCATTGGCCGTTTCAGATCAAG
LOC_Os01g62880
Os.7392.2.S1_x_at--505--5911Chr01:36745912..36745936 (25 bp)
GAGCTCAGTCCAGAGAACTTCGTCA
LOC_Os01g62880
Os.7392.2.S1_x_at--21--1891Chr01:36745979..36746003 (25 bp)
ACGATTCAGGCAAAGCTCGCGCGAT
LOC_Os01g62880
Os.7392.2.S1_x_at--455--7371Chr01:36746008..36746032 (25 bp)
GTGAGCAATTTCTCCTCCAAGAAGC
LOC_Os01g62880
Os.7392.2.S1_x_at--21--9291Chr01:36746064..36746088 (25 bp)
TCCGGCCGTTGATCAGGTCGAGTGC
LOC_Os01g62880
Os.7392.2.S1_x_at--55--2891Chr01:36746265..36746289 (25 bp)
AAGGGCATCGCCGTTGATTCGGTGT
LOC_Os01g62880
Os.7392.2.S1_x_at--468--2751Chr01:36746315..36746339 (25 bp)
AAGAACTCCGGCTCAGGTTGCTCTG
LOC_Os01g62880
Os.7392.2.S1_x_at--774--6111Chr01:36746363..36746387 (25 bp)
GAGTGTGCTTCCCAAGAGCGTCAGT
LOC_Os01g62880
Os.7392.2.S1_x_at--1082--2111Chr01:36746407..36746431 (25 bp)
ACATGGATCTGTTTGGTTGGTCTAT
LOC_Os01g62880
Os.7392.2.S1_x_at--1084--8871Chr01:36746435..36746459 (25 bp)
TGAGGAACTGTGTGCCAAGCTCTCT
LOC_Os01g62880
Os.7392.2.S1_x_at--1001--6171Chr01:36746732..36746756 (25 bp)
GAGGAGATGGATTTGCTCACCCCGA
LOC_Os01g62880
Target Sequence 
GATTCATTGGCCGTTTCAGATCAAGAAAGGCACGGAGCTCAGTCCAGAGAACTTCGTCAAGCCTGACATACCCAGCACCT
GGCGAGCGATGGAGCAGCTGTACGATTCAGGCAAAGCTCGCGCGATCGGCGTGAGCAATTTCTCCTCCAAGAAGCTTGGC
GATCTGCTCTGCGTCGCCCGCGTCCCTCCGGCCGTTGATCAGGTCGAGTGCCACCCGGGCTGGCAGCAGGCGAAGCTCAG
AGCGTTCTGCCACACCAGTGGCGTTCATCTCTCTGCGTATGCTCCATTGGGCAGGATGAAGGGCATCGCCGTTGATTCGG
TGTTGCCATCGGTAGCCGAGATGCTAGGAAGAACTCCGGCTCAGGTTGCTCTGCGCTGGGGTCTTCAGCAGGGTCAGAGT
GTGCTTCCCAAGAGCGTCAGTGAGGCGAGGTTGAAGGAGAACATGGATCTGTTTGGTTGGTCTATTCCTGAGGAACTGTG
TGCCAAGCTCTCTGAAATCGAACAGGTTAAGCAAATCAGAGGAGATGGATTTGCTCACCCCGA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.7392.2.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis