Browse Element(s) Details


OsAffx.25786.1.S1_x_at

Description tigr:9631.m06006
TID=OsAffx.25786.1
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=putative UDP-glucosyltransferase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os03g6096011/11UDP-glucoronosyl and UDP-glucosyl transferase family protein
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os03g60910Os.17149.1.S1_at11/113+34548697..34553294pentatricopeptide, putative, expressed
LOC_Os03g60910Os.17149.2.S1_x_at11/113+34548697..34553294pentatricopeptide, putative, expressed
LOC_Os03g60910OsAffx.20433.1.S1_x_at1/113+34548697..34553294pentatricopeptide, putative, expressed
LOC_Os03g60920Os.15547.1.S1_at11/113+34553529..34555886methylase family protein, expressed
LOC_Os03g60930NANA3+34557191..34564387RNA recognition motif family protein
LOC_Os03g60939Os.7448.1.S1_at11/113+34569708..34572289Dolichol-phosphate mannosyltransferase, putative, expressed
LOC_Os03g60950OsAffx.25785.1.S1_at11/113+34572844..34574104hypothetical protein
LOC_Os03g60960OsAffx.25786.1.S1_x_at11/113+34575876..34577373UDP-glucoronosyl and UDP-glucosyl transferase family protein
LOC_Os03g60976OsAffx.10407.1.S1_at11/113+34577953..34583576hypothetical protein
LOC_Os03g60976OsAffx.25788.2.S1_at11/113+34577953..34583576hypothetical protein
LOC_Os03g60992OsAffx.25788.1.S1_at11/113+34585146..34592484expressed protein
LOC_Os03g60992OsAffx.10408.1.S1_at11/113+34585146..34592484expressed protein
LOC_Os03g61010Os.32832.1.S1_a_at11/113+34602292..34607157TPR-containing protein kinase, putative, expressed

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.25786.1.S1_x_at--976--8351Chr03:34576785..34576809 (25 bp)
GGCGGAGTCGGTGCTGTACGTGAGC
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--815--8911Chr03:34576805..34576829 (25 bp)
TGAGCTTCGGTAGCCTGGCGAGCAT
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--426--4251Chr03:34577039..34577063 (25 bp)
CCGTGGGCGGGTTCTGGACTCACAA
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--697--7871Chr03:34577048..34577072 (25 bp)
GGTTCTGGACTCACAACGGGTGGAA
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--41--9471Chr03:34577051..34577075 (25 bp)
TCTGGACTCACAACGGGTGGAACTC
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--526--7291Chr03:34577101..34577125 (25 bp)
GTGCCGATGCTGTGCCGGCCAAGCT
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--802--4251Chr03:34577115..34577139 (25 bp)
CCGGCCAAGCTTCGGCGACCAGATG
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--929--8151Chr03:34577141..34577165 (25 bp)
GGAACGCGAGGTACGTGGAGCACGT
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--466--8491Chr03:34577167..34577191 (25 bp)
TGGAAGGCCGGGTTCGAGGTGGTCG
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--251--1131Chr03:34577303..34577327 (25 bp)
AGTGCACCGGCAAGGCCGGCTCGTC
LOC_Os03g60960
OsAffx.25786.1.S1_x_at--159--4271Chr03:34577318..34577342 (25 bp)
CCGGCTCGTCGGAGACGGCCATCGT
LOC_Os03g60960
Target Sequence 
GGCGGAGTCGGTGCTGTACGTGAGCTTCGGTAGCCTGGCGAGCATGGGCGCGCGGGAGCTCGTCGAGACGGCGTGGGGGA
TCGCCGGCAGCGGCGTGCCATTCCTCTGGGTGGTCCGGCCAGGCCTCGTCCGCGGCCGGCGCGCGGCGCCGGGCGAGCCA
ACGCGGCTGCTGCCGGAGGGGTTCGAGGCGGCGACGCGGCGGCGCGGGGTGGTGGTGGCGTGGGCGCCGCAGGAGGAGGT
GCTGCGCCACCGCGCCGTGGGCGGGTTCTGGACTCACAACGGGTGGAACTCGACGACGGAGAGCCTCGCCGAGGGGGTGC
CGATGCTGTGCCGGCCAAGCTTCGGCGACCAGATGGGGAACGCGAGGTACGTGGAGCACGTGTGGAAGGCCGGGTTCGAG
GTGGTCGGCGGCGAGCTCGAGAGGGGGGCGGTGGAGGAGGCCATCCGGCGGCTCATGGCGGAGAGCGACGGCGGCGAGAT
GAGGGCGCGGGCGCGCGAGCTGAAGAAGGCGGCGGCGGAGTGCACCGGCAAGGCCGGCTCGTCGGAGACGGCCATCGT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.25786.1.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis