Browse Element(s) Details


Os.11756.1.S1_at

Description gb:AK062233.1
DB_XREF= gi:32972251
TID=Os.11756.1
CNT=25
FEA=FLmRNA
TIER=FL+Stack
STK=8
UG=Os.11756 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) fructose-1,6-bisphosphatase (OJ1364E02.13), mRNA
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D10, full insert sequence.
FL= gb:AB007194.1 gb:AK062233.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os03g1605011/11Fructose-1,6-bisphosphatase, chloroplast precursor, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os03g15990OsAffx.25104.1.S1_at11/113+8794075..8796397hydroxyproline-rich glycoprotein family protein, putative
LOC_Os03g16000Os.34102.1.S1_a_at10/113+8798197..8803386Variant SH3 domain containing protein, expressed
LOC_Os03g16010Os.10798.1.S1_at11/113+8806805..8812628protein kinase, putative, expressed
LOC_Os03g16010Os.26733.3.S1_x_at3/113+8806805..8812628protein kinase, putative, expressed
LOC_Os03g16020Os.22731.1.S1_at11/113+8812766..881352917.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16020Os.57467.1.S1_x_at6/113+8812766..881352917.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16020Os.37773.1.S1_x_at4/113+8812766..881352917.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16030Os.37773.1.S1_x_at11/113+8813884..881465417.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16030Os.37773.1.S1_at11/113+8813884..881465417.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16030Os.57467.1.S1_x_at5/113+8813884..881465417.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16040Os.22730.1.S1_at11/113+8816812..881767617.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16040Os.37773.1.S1_x_at2/113+8816812..881767617.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16040Os.57467.1.S1_x_at1/113+8816812..881767617.4 kDa class I heat shock protein, putative, expressed
LOC_Os03g16050Os.11756.1.S1_at11/113+8820321..8822122Fructose-1,6-bisphosphatase, chloroplast precursor, putative, expressed
LOC_Os03g16050Os.11756.1.S1_s_at11/113+8820321..8822122Fructose-1,6-bisphosphatase, chloroplast precursor, putative, expressed
LOC_Os03g16060Os.49668.1.S1_at11/113+8830385..8833479lipase, putative, expressed
LOC_Os03g16070Os.9617.1.S1_at6/113+8833684..8838058expressed protein
LOC_Os03g16080Os.32299.1.S1_at11/113+8845017..8848272Mitochondrial carrier protein, expressed

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Gene Ontology Classification
GO idTypeName
GO:0005975biological_processcarbohydrate metabolism
GO:0006000biological_processfructose metabolism
GO:0042132molecular_functionfructose-bisphosphatase activity
GO:0042578molecular_functionphosphoric ester hydrolase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.11756.1.S1_at--966--1831Chr03:8821020..8821044 (25 bp)
ACGCTGGACCCGATGTACGGCGAGT
LOC_Os03g16050
Os.11756.1.S1_at--2--8531Chr03:8821016..8821040 (25 bp)
TGGACCCGATGTACGGCGAGTTCGT
LOC_Os03g16050
Os.11756.1.S1_at--1079--4051Chr03:8821010..8821034 (25 bp)
CGATGTACGGCGAGTTCGTGCTGAC
LOC_Os03g16050
Os.11756.1.S1_at--327--8751Chr03:8821007..8821031 (25 bp)
TGTACGGCGAGTTCGTGCTGACGCA
LOC_Os03g16050
Os.11756.1.S1_at--357--9051Chr03:8820974..8820998 (25 bp)
TGCAGATCCCCAAGGCAGGCAAGAT
LOC_Os03g16050
Os.11756.1.S1_at--450--551Chr03:8820969..8820993 (25 bp)
ATCCCCAAGGCAGGCAAGATCTATG
LOC_Os03g16050
Os.11756.1.S1_at--342--931Chr03:8820962..8820986 (25 bp)
AGGCAGGCAAGATCTATGCCTTCAA
LOC_Os03g16050
Os.11756.1.S1_at--407--931Chr03:8820958..8820982 (25 bp)
AGGCAAGATCTATGCCTTCAACGAG
LOC_Os03g16050
Os.11756.1.S1_at--904--7551Chr03:8820873..8820897 (25 bp)
GGGCCGTCCGGGAAGCCATACTCCG
LOC_Os03g16050
Os.11756.1.S1_at--229--8191Chr03:8820863..8820887 (25 bp)
GGAAGCCATACTCCGCGCGCTACAT
LOC_Os03g16050
Os.11756.1.S1_at--400--331Chr03:8820856..8820880 (25 bp)
ATACTCCGCGCGCTACATCGGCAGC
LOC_Os03g16050
Target Sequence 
ACGCTGGACCCGATGTACGGCGAGTTCGTGCTGACGCAGGAGAAGGTGCAGATCCCCAAGGCAGGCAAGATCTATGCCTT
CAACGAGGGCAACTACGCGCTCTGGGACGACAAGCTCAAGAGCTACATGGACAGCCTCAAGGAGCCCGGGCCGTCCGGGA
AGCCATACTCCGCGCGCTACATCGGCAGC

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.11756.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis