Browse Element(s) Details


Os.35432.2.S1_at

Description gb:NM_196145.1
DB_XREF= gi:37533649
TID=Os.35432.2
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.35432 (NCBI UniGene Cluster)
DEF=Oryza sativa (japonica cultivar-group) putative Receptor-like protein kinase (OSJNBa0091J06.14), mRNA.
PROD=putative Receptor-like protein kinase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os10g2286011/11Leucine Rich Repeat family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os10g22810NANA10+11522432..11524070hypothetical protein
LOC_Os10g22820OsAffx.30507.1.S1_at11/1110+11529025..11530397hypothetical protein
LOC_Os10g22820OsAffx.3274.1.S1_at2/1110+11529025..11530397hypothetical protein
LOC_Os10g22830OsAffx.30508.1.S1_at11/1110+11532563..11533984hypothetical protein
LOC_Os10g22840OsAffx.8201.1.S1_at10/1110+11537355..11538673retrotransposon protein, putative, unclassified
LOC_Os10g22840OsAffx.8201.1.S1_x_at10/1110+11537355..11538673retrotransposon protein, putative, unclassified
LOC_Os10g22840OsAffx.27937.1.S1_at1/1110+11537355..11538673retrotransposon protein, putative, unclassified
LOC_Os10g22850NANA10+11545534..11545737hypothetical protein
LOC_Os10g22860Os.35432.2.S1_at11/1110+11548749..11552028Leucine Rich Repeat family protein, expressed
LOC_Os10g22880NANA10+11556207..11557209hypothetical protein
LOC_Os10g22890OsAffx.8200.1.S1_at11/1110+11565120..11568331Leucine Rich Repeat family protein
LOC_Os10g22900OsAffx.30509.1.S1_at11/1110+11568857..11570381hypothetical protein
LOC_Os10g22910OsAffx.30510.1.S1_at11/1110+11572843..11573073hypothetical protein
LOC_Os10g22920OsAffx.18353.1.S1_at11/1110+11576485..11578482Cf2/Cf5 disease resistance protein homolog, putative

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Gene Ontology Classification
GO idTypeName
GO:0006468biological_processprotein amino acid phosphorylation
GO:0007169biological_processtransmembrane receptor protein tyrosine kinase signaling pathway
GO:0009598biological_processdetection of pathogenic bacteria
GO:0016020cellular_componentmembrane
GO:0004672molecular_functionprotein kinase activity
GO:0004674molecular_functionprotein serine/threonine kinase activity
GO:0004675molecular_functiontransmembrane receptor protein serine/threonine kinase activity
GO:0005515molecular_functionprotein binding
GO:0005524molecular_functionATP binding
GO:0016301molecular_functionkinase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.35432.2.S1_at--232--1131Chr10:11551352..11551376 (25 bp)
AGTGCAGAGATTGAGCATTGCTTCT
LOC_Os10g22860
Os.35432.2.S1_at--528--6511Chr10:11551377..11551401 (25 bp)
GATATCGCCGCTGCACTAGATTATT
LOC_Os10g22860
Os.35432.2.S1_at--878--2151Chr10:11551408..11551432 (25 bp)
ACAGCTGCCATCCAACAATAGTTCA
LOC_Os10g22860
Os.35432.2.S1_at--879--6751Chr10:11551428..11551452 (25 bp)
GTTCACTGTGATTTCAAGCCCAGCA
LOC_Os10g22860
Os.35432.2.S1_at--345--731Chr10:11551483..11551507 (25 bp)
ATGTTGGAGACCTTGGCCTTGCCAA
LOC_Os10g22860
Os.35432.2.S1_at--810--10671Chr10:11551501..11551525 (25 bp)
TTGCCAAGATTCTCACTGACCCAGA
LOC_Os10g22860
Os.35432.2.S1_at--929--5291Chr10:11551749..11551773 (25 bp)
GAAGGCGCCTACAAATGACATGTTT
LOC_Os10g22860
Os.35432.2.S1_at--112--2971Chr10:11551806..11551830 (25 bp)
AATGGCATATCCAGCAAGACTGATC
LOC_Os10g22860
Os.35432.2.S1_at--815--2751Chr10:11551821..11551845 (25 bp)
AAGACTGATCGATATTGTTGACCCC
LOC_Os10g22860
Os.35432.2.S1_at--526--7451Chr10:11551886..11551910 (25 bp)
GTGTCATGAGTTCAGTCACAAGACT
LOC_Os10g22860
Os.35432.2.S1_at--199--2371Chr10:11551933..11551957 (25 bp)
AAACCAACTGAGAGGCTGCGCATGA
LOC_Os10g22860
Target Sequence 
AGTGCAGAGATTGAGCATTGCTTCTGATATCGCCGCTGCACTAGATTATTTGCACAACAGCTGCCATCCAACAATAGTTC
ACTGTGATTTCAAGCCCAGCAACATTCTTCTTGGGGAGGACATGGTTGCGCATGTTGGAGACCTTGGCCTTGCCAAGATT
CTCACTGACCCAGAAGGAGAGCAATTGATCAATTCAAAGAGTTCTGTAGGGCTAATGGGAACAATTGGATATATTGCTCC
AGAATATGCTGAATGTGGTCAAATTTCTCCATCTGGTGATGTATATAGCTTTGGTATAGTGCTCCTTGAGATGTTTACAG
GGAAGGCGCCTACAAATGACATGTTTACTGATGGATTGACATTGCAGAAGTATGCAGAAATGGCATATCCAGCAAGACTG
ATCGATATTGTTGACCCCCATCTGCTATCAATTGAGAACACATTGGGAGAAATCAACTGTGTCATGAGTTCAGTCACAAG
ACTCGCACTGGTATGCAGTAGGATGAAACCAACTGAGAGGCTGCGCATGA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.35432.2.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis