Browse Element(s) Details


Os.44934.1.S1_at

Description gb:NM_185174.1
DB_XREF= gi:34897433
GEN=OSJNBb0096M04.15
TID=Os.44934.1
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.44934 (NCBI UniGene Cluster)
DEF=Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBb0096M04.15), mRNA.
PROD=putative cytochrome P450
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os03g6331011/11Cytochrome P450 71E1, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os03g63270Os.27955.2.S1_x_at11/113+35692302..35696744regulatory protein, putative, expressed
LOC_Os03g63270Os.27955.2.S1_at11/113+35692302..35696744regulatory protein, putative, expressed
LOC_Os03g63270Os.27955.1.S1_at10/113+35692302..35696744regulatory protein, putative, expressed
LOC_Os03g63270Os.27955.1.S2_at9/113+35692302..35696744regulatory protein, putative, expressed
LOC_Os03g63280Os.10657.1.S1_at11/113+35705897..35707930regulatory protein, putative, expressed
LOC_Os03g63290Os.25462.1.S1_at11/113+35708735..35711180oxidoreductase, short chain dehydrogenase/reductase family protein, expressed
LOC_Os03g63300Os.33275.1.S1_at11/113+35711634..35716393NLI interacting factor, putative, expressed
LOC_Os03g63300Os.26818.2.S1_at1/113+35711634..35716393NLI interacting factor, putative, expressed
LOC_Os03g63310Os.44934.1.S1_at11/113+35716842..35720269Cytochrome P450 71E1, putative, expressed
LOC_Os03g63320OsAffx.10404.1.S1_at11/113+35724564..35725334SAM domain family protein, expressed
LOC_Os03g63330Os.46611.1.S1_at11/113+35728998..35734424aspartate kinase family protein, expressed
LOC_Os03g63330Os.46611.1.S1_x_at11/113+35728998..35734424aspartate kinase family protein, expressed
LOC_Os03g63330Os.27606.1.S1_at11/113+35728998..35734424aspartate kinase family protein, expressed
LOC_Os03g63330Os.5265.1.S1_x_at1/113+35728998..35734424aspartate kinase family protein, expressed
LOC_Os03g63350OsAffx.13592.1.S1_at11/113+35738193..35739308hypothetical protein
LOC_Os03g63360Os.20351.1.S1_at11/113+35744991..35747824expressed protein

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Gene Ontology Classification
GO idTypeName
GO:0019825molecular_functionoxygen binding
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.44934.1.S1_at--1067--5771Chr03:35719324..35719348 (25 bp)
GACGAGCTCGGTGACGATCCTGTGG
LOC_Os03g63310
Os.44934.1.S1_at--1047--7751Chr03:35719333..35719357 (25 bp)
GGTGACGATCCTGTGGGCGATGGCG
LOC_Os03g63310
Os.44934.1.S1_at--13--9031Chr03:35719392..35719416 (25 bp)
TGCAAGCCGAGATCAGGGCCACCGT
LOC_Os03g63310
Os.44934.1.S1_at--410--2671Chr03:35719395..35719419 (25 bp)
AAGCCGAGATCAGGGCCACCGTCGG
LOC_Os03g63310
Os.44934.1.S1_at--176--871Chr03:35719428..35719452 (25 bp)
ATGGCGGCGGCATGGTGCAGCCGGA
LOC_Os03g63310
Os.44934.1.S1_at--796--4051Chr03:35719461..35719485 (25 bp)
CGAGGCTCGCCTACCTCAAGATGGT
LOC_Os03g63310
Os.44934.1.S1_at--480--6351Chr03:35719528..35719552 (25 bp)
GATGCCGCGGGAGACGATGCGCGAC
LOC_Os03g63310
Os.44934.1.S1_at--756--4591Chr03:35719548..35719572 (25 bp)
GCGACGTGAGGATCGGCGGGTACGA
LOC_Os03g63310
Os.44934.1.S1_at--507--8731Chr03:35719650..35719674 (25 bp)
TGTTCGACCCGGACAGGTTCGAGGC
LOC_Os03g63310
Os.44934.1.S1_at--854--8351Chr03:35719672..35719696 (25 bp)
GGCGAAGCGGGTGGAGTTCAACGGC
LOC_Os03g63310
Os.44934.1.S1_at--800--1211Chr03:35719686..35719710 (25 bp)
AGTTCAACGGCGGGCACTTCGAGCT
LOC_Os03g63310
Target Sequence 
GACGAGCTCGGTGACGATCCTGTGGGCGATGGCGGAGCTGATGCGGTCGCCGCGGGTGATGCGGAAGGTGCAAGCCGAGA
TCAGGGCCACCGTCGGCGACCGAGATGGCGGCGGCATGGTGCAGCCGGACGACCTGCCGAGGCTCGCCTACCTCAAGATG
GTGGTGAAGGAGACGCTGCGGCTGCACCCGCCGGCGACGCTGCTGATGCCGCGGGAGACGATGCGCGACGTGAGGATCGG
CGGGTACGAGGTGGCGGCGAGGACGCGGGTGATGGTGAACGCGTGGGCGATCGGGAGGGACGCGGCGAGGTGGGAGGAGG
CGGAGGTGTTCGACCCGGACAGGTTCGAGGCGAAGCGGGTGGAGTTCAACGGCGGGCACTTCGAGCT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.44934.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis