Browse Element(s) Details


Os.6634.1.S1_at

Description gb:AB050624.1
DB_XREF= gi:21698921
TID=Os.6634.1
CNT=69
FEA=FLmRNA
TIER=FL
STK=5
UG=Os.6634 (NCBI UniGene Cluster)
UG_TITLE=OsAK mRNA for adenosine kinase, complete cds
DEF=Oryza sativa OsAK mRNA for adenosine kinase, complete cds.
FL= gb:AK101791.1 gb:AB050624.1 gb:AK059771.1 gb:AK059188.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os02g4159011/11Adenosine kinase 2, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os02g41550Os.19289.1.S1_a_at11/112+24909993..24916215Cryptochrome 2 apoprotein, putative, expressed
LOC_Os02g41550Os.48589.1.A1_at8/112+24909993..24916215Cryptochrome 2 apoprotein, putative, expressed
LOC_Os02g41560OsAffx.24669.1.S1_at11/112+24917999..24919480pentatricopeptide, putative
LOC_Os02g41570NANA2+24923935..24924430hypothetical protein
LOC_Os02g41580OsAffx.12442.1.S1_at11/112+24929110..24930599Protein kinase domain containing protein, expressed
LOC_Os02g41590Os.6634.1.S1_at11/112+24934935..24940779Adenosine kinase 2, putative, expressed
LOC_Os02g41600NANA2+24946686..24947233hypothetical protein
LOC_Os02g41610OsAffx.2935.1.S1_at11/112+24950936..24954077expressed protein
LOC_Os02g41620NANA2+24956570..24957011hypothetical protein
LOC_Os02g41630Os.50466.1.S1_at11/112+24964832..24971418Phenylalanine ammonia-lyase, putative, expressed
LOC_Os02g41630Os.9330.4.S1_x_at11/112+24964832..24971418Phenylalanine ammonia-lyase, putative, expressed
LOC_Os02g41630Os.9330.1.S1_x_at11/112+24964832..24971418Phenylalanine ammonia-lyase, putative, expressed
LOC_Os02g41630Os.9330.1.S2_x_at9/112+24964832..24971418Phenylalanine ammonia-lyase, putative, expressed
LOC_Os02g41630Os.9330.2.S1_a_at8/112+24964832..24971418Phenylalanine ammonia-lyase, putative, expressed

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Gene Ontology Classification
GO idTypeName
GO:0006169biological_processadenosine salvage
GO:0004001molecular_functionadenosine kinase activity
GO:0016301molecular_functionkinase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.6634.1.S1_at--313--5251Chr02:24936838..24936862 (25 bp)
GAATCTTTGCTAAAGTCCGTGGATG
LOC_Os02g41590
Os.6634.1.S1_at--16--6391Chr02:24936714..24936738 (25 bp)
GATCGCGTTGAAGATTTCCCAGCTT
LOC_Os02g41590
Os.6634.1.S1_at--388--6591Chr02:24936663..24936687 (25 bp)
GATTGCCGTGATTACTCAAGGTGCT
LOC_Os02g41590
Os.6634.1.S1_at--92--4751Chr02:24936641..24936665 (25 bp)
GCTGATCCAGTAGTTGTCGCTGAGG
LOC_Os02g41590
Os.6634.1.S1_at--450--8971Chr02:24935805..24935829 (25 bp)
TGAAAACATTCCCTGTGATCCTACT
LOC_Os02g41590
Os.6634.1.S1_at--1140--7391Chr02:24935298..24935322 (25 bp)
GTGATGCCTTTGTTGGAGGCTTCCT
LOC_Os02g41590
Os.6634.1.S1_at--725--891Chr02:24935282..24935306 (25 bp)
AGGCTTCCTCTCACAATTGGTTCAA
LOC_Os02g41590
Os.6634.1.S1_at--940--5291Chr02:24935234..24935258 (25 bp)
GAAGGCTGGTTGCTATGCCGCAAAT
LOC_Os02g41590
Os.6634.1.S1_at--703--2291Chr02:24935213..24935237 (25 bp)
AAATGTTATCATCCAGCGTTCTGGC
LOC_Os02g41590
Os.6634.1.S1_at--421--10251Chr02:24935099..24935123 (25 bp)
TTTGGTGTGTTCTACCTGTACCATC
LOC_Os02g41590
Os.6634.1.S1_at--723--8751Chr02:24935083..24935107 (25 bp)
TGTACCATCTCGAGGCTTTCCATAT
LOC_Os02g41590
Target Sequence 
GAATCTTTGCTAAAGTCCGTGGATGGGAGACTGAGAATGTTGAGGAGATCGCGTTGAAGATTTCCCAGCTTCCATTGGCC
TCTGGAAAACAAAAGAGGATTGCCGTGATTACTCAAGGTGCTGATCCAGTAGTTGTCGCTGAGGATGGACAGGTGAAAAC
ATTCCCTGTGATCCTACTGCCAAAGGAGAAGCTTGTTGACACCAATGGCGCTGGTGATGCCTTTGTTGGAGGCTTCCTCT
CACAATTGGTTCAACAAAAGAGCATTGAGGACTCTGTGAAGGCTGGTTGCTATGCCGCAAATGTTATCATCCAGCGTTCT
GGCTGCACTTACCCTGAGAAGCCTGATTTCAACTAGGGCNAACCCANCCACATATTGAGGAACAATTATTCGCACATCCA
ACCTACTAGTGGTTTGGTGTGTTCTACCTGTACCATCTCGAGGCTTTCCATAT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.6634.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis