Description |
gb:AK064814.1 DB_XREF=
gi:32974832
TID=Os.10728.1 CNT=15 FEA=FLmRNA TIER=FL STK=1
UG=Os.10728 (NCBI UniGene Cluster) UG_TITLE=(japonica cultivar-group) cDNA
clone:J013000E09, full insert sequence DEF=Oryza sativa (japonica cultivar-group) cDNA
clone:J013000E09, full insert sequence. FL=
gb:AK064814.1 REP_ORG=O. sativa |
Associated TIGR Gene Locus | TIGR Locus | Matching Probes | Description |
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LOC_Os02g46260 | 11/11 | Serine carboxypeptidase family protein, expressed | LOC_Os01g62900 | 1/11 | Delta 1-pyrroline-5-carboxylate synthetase, putative, expressed | LOC_Os01g43520 | 1/11 | ceramidase family protein, putative, expressed | LOC_Os12g36570 | 1/11 | retrotransposon protein, putative, unclassified | LOC_Os10g32990 | 1/11 | Leucine Rich Repeat family protein, expressed | LOC_Os03g52040 | 1/11 | Serine carboxypeptidase family protein, expressed | LOC_Os05g43830 | 1/11 | Proline iminopeptidase, putative, expressed | LOC_Os04g44730 | 1/11 | Lanthionine synthetase C-like protein, expressed | LOC_Os01g33930 | 1/11 | expressed protein |
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Gene Context (flanking 25kb) |
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Gene Ontology Classification | GO id | Type | Name |
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GO:0006468 | biological_process | protein amino acid phosphorylation | GO:0006508 | biological_process | proteolysis | GO:0006561 | biological_process | proline biosynthesis | GO:0007169 | biological_process | transmembrane receptor protein tyrosine kinase signaling pathway | GO:0009269 | biological_process | response to desiccation | GO:0009414 | biological_process | response to water deprivation | GO:0009737 | biological_process | response to abscisic acid stimulus | GO:0019748 | biological_process | secondary metabolism | GO:0042538 | biological_process | hyperosmotic salinity response | GO:0003824 | molecular_function | catalytic activity | GO:0004185 | molecular_function | serine carboxypeptidase activity | GO:0004672 | molecular_function | protein kinase activity | GO:0004674 | molecular_function | protein serine/threonine kinase activity | GO:0005515 | molecular_function | protein binding | GO:0005524 | molecular_function | ATP binding | GO:0016301 | molecular_function | kinase activity | GO:0016752 | molecular_function | sinapoyltransferase activity | GO:0016804 | molecular_function | prolyl aminopeptidase activity | GO:0017040 | molecular_function | ceramidase activity | GO:0017084 | molecular_function | delta1-pyrroline-5-carboxylate synthetase activity |
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Probe Info |
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Target Sequence | ACACGTGATCTTCCAAGCAGCATAGAATGCCATTTCAACGTCACCACCAGGGGTTACCGTGCTCTTGTGTACAGCGGAGA
CCACGACCCTATTGTGCCATTCTCAGGCACGCAGGCATGGATAAGATCATTAAACTTTTCCATTGTTGATGATTGGAGAG
CATGGCACCTTGATGGCCAGGCTGCAGGGTTAAATTCACAATCAAGTATGCTAACAACCTGACCTTTGCGACAATAAAGG
GTGGTTGCCATATTCCTCCCGAAAATCGGCCNAAGGAATCCTTCATTATGGCAAAACGGTGGCTGGCTGGTGGACCCCTC
TNATGTGCCGTCGCGCACAATACGGCATCTCTGAATTCAGATTCCGATCATCATCAACATATGTAATGTGCTCATTATAT
TGAGTAAATCAATATAACTAGCTGGATGGCCCGTGCAATTGCGCGGCTAGCACCCAAACAAAATTATATATTTTTTATAT
GATTTTACTTAAAATTTATTAGATAGCTATCTTATTATCTTAAGACTTTGAAAGACCAACCCTTATCATCTCGTGTTTCT
AATTATATAGTTTTTAAAAGTCACACCAGTTGCTACCC BLASTn GenBank NR |
Expression Profiles | Gene Chronologer Gene Chronologer (Grouped) Heterosis View Gene Correlator (coexpression analysis) SALK RiceGE Rice MPSS RiceArray Coexpression Database |
Miscellaneous | SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project: Putative homologies in ricePutative homologies in arabidopsis |