Browse Element(s) Details


Os.8045.1.S1_at

Description gb:AU067881
DB_XREF= gi:5002772
DB_XREF=AU067881
CLONE=C10481_10Z
TID=Os.8045.1
CNT=12
FEA=mRNA
TIER=ConsEnd
STK=1
UG=Os.8045 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) putative anthocyanin 5-O-glucosyltransferase (P0406H10.16), mRNA
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g0844011/11Indole-3-acetate beta-glucosyltransferase, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g08420Os.980.1.S1_a_at10/111+4130505..4137434expressed protein
LOC_Os01g08430Os.17699.2.S1_x_at11/111+4140153..4147215expressed protein
LOC_Os01g08430Os.17699.1.S1_at11/111+4140153..4147215expressed protein
LOC_Os01g08440Os.8045.1.S1_at11/111+4149879..4151471Indole-3-acetate beta-glucosyltransferase, putative, expressed
LOC_Os01g08440OsAffx.9021.1.S1_x_at1/111+4149879..4151471Indole-3-acetate beta-glucosyltransferase, putative, expressed
LOC_Os01g08450Os.7869.1.S1_at11/111+4157347..4161166GTP-binding protein YPTM2, putative, expressed
LOC_Os01g08450Os.7869.1.S1_x_at11/111+4157347..4161166GTP-binding protein YPTM2, putative, expressed
LOC_Os01g08450OsAffx.24709.1.S1_x_at3/111+4157347..4161166GTP-binding protein YPTM2, putative, expressed
LOC_Os01g08460Os.27659.1.S1_x_at11/111+4163989..4170191TMS membrane family protein, putative, expressed
LOC_Os01g08460OsAffx.10965.1.S1_at11/111+4163989..4170191TMS membrane family protein, putative, expressed
LOC_Os01g08460Os.46982.1.A1_at7/111+4163989..4170191TMS membrane family protein, putative, expressed
LOC_Os01g08460Os.36817.1.S1_at1/111+4163989..4170191TMS membrane family protein, putative, expressed
LOC_Os01g08470Os.8113.1.S1_at11/111+4175962..4178214transposon protein, putative, CACTA, En/Spm sub-class, expressed
LOC_Os01g08470Os.8113.2.S1_x_at11/111+4175962..4178214transposon protein, putative, CACTA, En/Spm sub-class, expressed

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Gene Ontology Classification
GO idTypeName
GO:0009920biological_processcell plate formation (sensu Magnoliophyta)
GO:0009524cellular_componentphragmoplast
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.8045.1.S1_at--1105--9111Chr01:4150400..4150424 (25 bp)
TGCTGAGGAAGGACAACCGCGGCGA
LOC_Os01g08440
Os.8045.1.S1_at--119--8611Chr01:4150335..4150359 (25 bp)
TGGTGCGACCAGGTGAGGGTGCTCG
LOC_Os01g08440
Os.8045.1.S1_at--331--1071Chr01:4150217..4150241 (25 bp)
AGTGGACGGACCAGGGCACCAACGC
LOC_Os01g08440
Os.8045.1.S1_at--1068--1431Chr01:4150010..4150034 (25 bp)
AGAAGAACCTGCAGGCGTACGTTGG
LOC_Os01g08440
Os.8045.1.S1_at--655--4011Chr01:4149995..4150019 (25 bp)
CGTACGTTGGGAAGATTCGCGCCAA
LOC_Os01g08440
Os.8045.1.S1_at--527--5351Chr01:4149985..4150009 (25 bp)
GAAGATTCGCGCCAATTAGATGTGT
LOC_Os01g08440
Os.8045.1.S1_at--1123--6571Chr01:4149982..4150006 (25 bp)
GATTCGCGCCAATTAGATGTGTCTT
LOC_Os01g08440
Os.8045.1.S1_at--1049--9331Chr01:4149979..4150003 (25 bp)
TCGCGCCAATTAGATGTGTCTTATT
LOC_Os01g08440
Os.8045.1.S1_at--182--5191Chr01:4149947..4149971 (25 bp)
GAATTGGGATGATGCTCCAATTTTA
LOC_Os01g08440
Os.8045.1.S1_at--1130--731Chr01:4149921..4149945 (25 bp)
ATGTAATTAGCCGAATTTCCTATGT
LOC_Os01g08440
Os.8045.1.S1_at--1013--1651Chr01:4149913..4149937 (25 bp)
AGCCGAATTTCCTATGTAATTGTGG
LOC_Os01g08440
Target Sequence 
TGCTGAGGAAGGACAACCGCGGCGAGGCTGACGACGTCGCCATCGACGGCGGCGTGGTGGTGGAGTGGTGCGACCAGGTG
AGGGTGCTCGGGCACCCGGCGGTGGGGTGCTTCGTGACGCACTGCGGGTGGAACTCGACGCTGGAGGCGGTGGCGAGCGG
CGTGCCGGCGGTGTGCGTGCCGCAGTGGACGGACCAGGGCACCAACGCGTGGCTCGTCGCCGAGCGGCTCGGCGCCGGCG
TCAGGGCCNCCGTGAGCGAGGTCGACGGCGTGCTGGANGCCGGCGANCNTGAGGCGGTGCATCGACGCCNGCCACGTCGG
NNGCGGTGCGCGCCAGCGCGGCGGCGTGGAGAGAGAAGGCGCGGGCGGCGGTGGCCGACGGCGGCTCGTCGGAGAAGAAC
CTGCAGGCGTACGTTGGGAAGATTCGCGCCAATTAGATGTGTCTTATTGGANTTTTGAATTGGGATGATGCTCCAATTTT
ATATGTAATTAGCCGAATTTCCTATGTAATTGTGG

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.8045.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis