Browse Element(s) Details


OsAffx.15908.4.S1_at

Description tigr:9634.m04190
TID=OsAffx.15908.4
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=hypothetical protein
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os06g4340011/11Cytochrome P450 71D7, putative
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os06g43350OsAffx.28078.1.S1_x_at11/116+26059869..26064360Cytochrome P450 family protein, expressed
LOC_Os06g43350OsAffx.28078.1.S1_at11/116+26059869..26064360Cytochrome P450 family protein, expressed
LOC_Os06g43350OsAffx.28081.1.S1_x_at1/116+26059869..26064360Cytochrome P450 family protein, expressed
LOC_Os06g43350OsAffx.26754.1.S1_x_at1/116+26059869..26064360Cytochrome P450 family protein, expressed
LOC_Os06g43350OsAffx.20024.1.S1_x_at1/116+26059869..26064360Cytochrome P450 family protein, expressed
LOC_Os06g43360OsAffx.5089.1.S1_at11/116+26067995..26068468hypothetical protein
LOC_Os06g43370OsAffx.15908.2.S1_at11/116+26071381..26073061Cytochrome P450 family protein
LOC_Os06g43370OsAffx.15908.2.S1_x_at11/116+26071381..26073061Cytochrome P450 family protein
LOC_Os06g43370OsAffx.26754.1.S1_x_at1/116+26071381..26073061Cytochrome P450 family protein
LOC_Os06g43384OsAffx.15908.5.S1_at11/116+26081409..26086094Cytochrome P450 family protein, expressed
LOC_Os06g43384OsAffx.15908.3.S1_at11/116+26081409..26086094Cytochrome P450 family protein, expressed
LOC_Os06g43400OsAffx.15908.4.S1_at11/116+26088783..26089887Cytochrome P450 71D7, putative
LOC_Os06g43400OsAffx.28078.1.S1_x_at1/116+26088783..26089887Cytochrome P450 71D7, putative
LOC_Os06g43400OsAffx.15908.1.S1_x_at1/116+26088783..26089887Cytochrome P450 71D7, putative
LOC_Os06g43410OsAffx.15908.1.S1_x_at11/116+26091519..26093624Cytochrome P450 family protein, expressed
LOC_Os06g43420OsAffx.15909.1.S1_at11/116+26096157..26097854Cytochrome P450 family protein, expressed
LOC_Os06g43430Os.22415.1.S1_s_at11/116+26104134..26106279Cytochrome P450 family protein, expressed
LOC_Os06g43430Os.8493.1.A1_at11/116+26104134..26106279Cytochrome P450 family protein, expressed
LOC_Os06g43440OsAffx.5093.1.S1_at11/116+26107629..26108557Cytochrome P450 71D8, putative, expressed
LOC_Os06g43450NANA6+26110126..26113417retrotransposon protein, putative, unclassified
LOC_Os06g43460NANA6+26114047..26120202retrotransposon protein, putative, unclassified

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Gene Ontology Classification
GO idTypeName
GO:0019825molecular_functionoxygen binding
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.15908.4.S1_at--758--9191Chr06:26089532..26089556 (25 bp)
TGCCACGCGAGTGCACGATCGGTCG
LOC_Os06g43400
OsAffx.15908.4.S1_at--674--1831Chr06:26089536..26089560 (25 bp)
ACGCGAGTGCACGATCGGTCGCGAC
LOC_Os06g43400
OsAffx.15908.4.S1_at--1065--9011Chr06:26089543..26089567 (25 bp)
TGCACGATCGGTCGCGACGAGCGGT
LOC_Os06g43400
OsAffx.15908.4.S1_at--425--5731Chr06:26089803..26089827 (25 bp)
GACTGAGGCGTTCGGTATCACTTCA
LOC_Os06g43400
OsAffx.15908.4.S1_at--306--3871Chr06:26089805..26089829 (25 bp)
CTGAGGCGTTCGGTATCACTTCACG
LOC_Os06g43400
OsAffx.15908.4.S1_at--989--8871Chr06:26089806..26089830 (25 bp)
TGAGGCGTTCGGTATCACTTCACGC
LOC_Os06g43400
OsAffx.15908.4.S1_at--512--831Chr06:26089808..26089832 (25 bp)
AGGCGTTCGGTATCACTTCACGCCG
LOC_Os06g43400
OsAffx.15908.4.S1_at--201--6711Chr06:26089812..26089836 (25 bp)
GTTCGGTATCACTTCACGCCGGAAG
LOC_Os06g43400
OsAffx.15908.4.S1_at--98--9431Chr06:26089814..26089838 (25 bp)
TCGGTATCACTTCACGCCGGAAGGA
LOC_Os06g43400
OsAffx.15908.4.S1_at--728--7851Chr06:26089816..26089840 (25 bp)
GGTATCACTTCACGCCGGAAGGAGA
LOC_Os06g43400
OsAffx.15908.4.S1_at--1077--3311Chr06:26089821..26089845 (25 bp)
CACTTCACGCCGGAAGGAGAATCTC
LOC_Os06g43400
Target Sequence 
TGCCACGCGAGTGCACGATCGGTCGCGACGAGCGGTACTGGCCCGGCGGCTCGCCGGAGGAGTTCCGGCCGGAGCGGTTC
GACGACGGTGAGGCGACCGCCGCGGTGGACTTCAGGGGCGCCGACTTCGAGCTCCTGCCGTTCGGCGGCGGCCGGCGGAT
GTGCCCCGGGATGGCGTTCGGGCTTGCCAACGTGGAGCTCCCTCTCTCCAGCCTGCTCTTCCACTTCGACTGGGAGGTGC
CTGGCATGGCCGACCCGACCAAGCTCGACATGACTGAGGCGTTCGGTATCACTTCACGCCGGAAGGAGAATCTC

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.15908.4.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis