Browse Element(s) Details


OsAffx.30695.3.S1_x_at

Description tigr:9638.m03311
TID=OsAffx.30695.3
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=putative cytochrome P450
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os10g3710011/11Cytochrome P450 family protein
LOC_Os10g370706/11Cytochrome P450 family protein
LOC_Os10g370342/11Cytochrome P450 family protein
LOC_Os10g369602/11transposon protein, putative, unclassified, expressed
LOC_Os10g370502/11transposon protein, putative, unclassified, expressed
LOC_Os06g426101/11Cytochrome P450 89A2, putative
LOC_Os10g371601/11transposon protein, putative, unclassified, expressed
LOC_Os10g370201/11transposon protein, putative, unclassified
LOC_Os10g369801/11transposon protein, putative, unclassified, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os10g37034Os.46592.1.S1_at11/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034Os.46592.2.S1_x_at9/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034OsAffx.30695.2.S1_x_at5/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034OsAffx.30695.4.S1_x_at5/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034OsAffx.30695.4.S1_at4/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034OsAffx.30695.3.S1_x_at2/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034Os.46643.1.S1_x_at2/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034OsAffx.30695.1.S1_x_at1/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37034Os.51397.1.S1_at1/1110+19499596..19503060Cytochrome P450 family protein
LOC_Os10g37050OsAffx.30695.2.S1_x_at11/1110+19508153..19509737transposon protein, putative, unclassified, expressed
LOC_Os10g37050OsAffx.30695.2.S1_at11/1110+19508153..19509737transposon protein, putative, unclassified, expressed
LOC_Os10g37050Os.46643.1.S1_x_at3/1110+19508153..19509737transposon protein, putative, unclassified, expressed
LOC_Os10g37050OsAffx.30695.4.S1_x_at2/1110+19508153..19509737transposon protein, putative, unclassified, expressed
LOC_Os10g37050OsAffx.30695.3.S1_x_at2/1110+19508153..19509737transposon protein, putative, unclassified, expressed
LOC_Os10g37050OsAffx.30695.1.S1_x_at1/1110+19508153..19509737transposon protein, putative, unclassified, expressed
LOC_Os10g37060Os.46503.1.S1_at11/1110+19510933..19512780T-complex protein 1, delta subunit, putative, expressed
LOC_Os10g37070OsAffx.30695.1.S1_x_at11/1110+19517847..19519115Cytochrome P450 family protein
LOC_Os10g37070OsAffx.30695.1.S1_at11/1110+19517847..19519115Cytochrome P450 family protein
LOC_Os10g37070OsAffx.30695.3.S1_x_at6/1110+19517847..19519115Cytochrome P450 family protein
LOC_Os10g37070OsAffx.30695.4.S1_x_at1/1110+19517847..19519115Cytochrome P450 family protein
LOC_Os10g37070OsAffx.30695.2.S1_x_at1/1110+19517847..19519115Cytochrome P450 family protein
LOC_Os10g37070OsAffx.30725.2.S1_x_at1/1110+19517847..19519115Cytochrome P450 family protein
LOC_Os10g37070Os.46643.1.S1_x_at1/1110+19517847..19519115Cytochrome P450 family protein
LOC_Os10g37079NANA10+19522165..19522383hypothetical protein
LOC_Os10g37090Os.18362.1.S1_at8/1110+19524163..19526198expressed protein
LOC_Os10g37100OsAffx.30695.3.S1_x_at11/1110+19526960..19528498Cytochrome P450 family protein
LOC_Os10g37100OsAffx.30695.1.S1_x_at4/1110+19526960..19528498Cytochrome P450 family protein
LOC_Os10g37100OsAffx.30695.2.S1_x_at2/1110+19526960..19528498Cytochrome P450 family protein
LOC_Os10g37100OsAffx.30695.4.S1_x_at2/1110+19526960..19528498Cytochrome P450 family protein
LOC_Os10g37100Os.46643.1.S1_x_at1/1110+19526960..19528498Cytochrome P450 family protein
LOC_Os10g37110Os.22726.1.A1_at9/1110+19529099..19530997transposon protein, putative, unclassified, expressed
LOC_Os10g37110Os.46643.1.S1_x_at1/1110+19529099..19530997transposon protein, putative, unclassified, expressed
LOC_Os10g37110OsAffx.30695.2.S1_x_at1/1110+19529099..19530997transposon protein, putative, unclassified, expressed
LOC_Os10g37110OsAffx.30695.4.S1_x_at1/1110+19529099..19530997transposon protein, putative, unclassified, expressed
LOC_Os10g37120Os.46643.1.S1_x_at1/1110+19534604..19536163transposon protein, putative, unclassified
LOC_Os10g37160Os.46872.1.S1_at11/1110+19551715..19553585transposon protein, putative, unclassified, expressed
LOC_Os10g37160OsAffx.30695.2.S1_x_at2/1110+19551715..19553585transposon protein, putative, unclassified, expressed
LOC_Os10g37160OsAffx.30725.2.S1_x_at2/1110+19551715..19553585transposon protein, putative, unclassified, expressed
LOC_Os10g37160OsAffx.30695.3.S1_x_at1/1110+19551715..19553585transposon protein, putative, unclassified, expressed
LOC_Os10g37160OsAffx.30695.4.S1_x_at1/1110+19551715..19553585transposon protein, putative, unclassified, expressed
LOC_Os10g37160Os.46643.1.S1_x_at1/1110+19551715..19553585transposon protein, putative, unclassified, expressed

Select all/Clear all

Gene Ontology Classification
GO idTypeName
GO:0019825molecular_functionoxygen binding
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.30695.3.S1_x_at--635--3812Chr10:19518440..19518464 (25 bp)
CTCCACCGGGCTACAATGGATCATG
LOC_Os10g37070
OsAffx.30695.3.S1_x_at--418--5751Chr10:19527508..19527532 (25 bp)
GAGCTGGTCAAGAACCCGGCCGTGC
LOC_Os10g37100
OsAffx.30695.3.S1_x_at--205--2752Chr10:19518477..19518501 (25 bp)
AAGAACCCGGCCGTGCAGGAGAAGC
LOC_Os10g37070
OsAffx.30695.3.S1_x_at--248--3491Chr10:19527484..19527508 (25 bp)
CAGGAGAAGCTCTACGCCGAGATCA
LOC_Os10g37100
OsAffx.30695.3.S1_x_at--107--952Chr10:19518568..19518592 (25 bp)
AGGACAACAAGATGCCGTACCTCAA
LOC_Os10g37070
OsAffx.30695.3.S1_x_at--659--4231Chr10:19527381..19527405 (25 bp)
CCGTGGTCAAGGAAGGCCTGCGCAA
LOC_Os10g37100
OsAffx.30695.3.S1_x_at--625--2875Chr10:19518693..19518717 (25 bp)
AAGGGCGCCACGGTGAACTTCATGG
LOC_Os10g37070
OsAffx.30695.3.S1_x_at--581--3978Chr10:19553003..19553027 (25 bp)
CGGTGAACTTCATGGTGGCCGAGAT
LOC_Os10g37160
OsAffx.30695.3.S1_x_at--380--3931Chr10:19527173..19527197 (25 bp)
CGGCGTCGACATGCACGGGACCAAG
LOC_Os10g37100
OsAffx.30695.3.S1_x_at--428--4292Chr10:19518896..19518920 (25 bp)
CCTCGAGTACTTCGTGGGATCCATG
LOC_Os10g37070
OsAffx.30695.3.S1_x_at--357--7012Chr10:19518902..19518926 (25 bp)
GTACTTCGTGGGATCCATGGTGATG
LOC_Os10g37070
Target Sequence 
CTCCACCGGGCTACAATGGATCATGGCCGAGCTGGTCAAGAACCCGGCCGTGCAGGAGAAGCTCTACGCCGAGATCAACG
CCACCTGCGGCGGCGACGACGAGCTCCTGGAGCGGAACGTGAGGGACAAGGACAACAAGATGCCGTACCTCAACGCCGTG
GTCAAGGAAGGCCTGCGCAAGCACCCGCCGGGCCACTTCGTGCTGCCGCACAAGGCGGCGGAGGACATGGACGTCGGCGG
GTACCTCATCCCCAAGGGCGCCACGGTGAACTTCATGGTGGCCGAGATCGGGAGGGACGAGAGAGAATGGGAGAACCCAA
TGCAGTTCATGCCGGAGAGGTTCTTGGACGGCGGCCATGGCGCCGGCGTCGACATGCACGGGACCAAGGGCATCAAGATG
ATGCCGTTCGGCGTCGGGCGGAGGATCTGCGCCGGGCTCAACATCGCCATGCTCCACCTCGAGTACTTCGTGGGATCCAT
GGTGATG

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.30695.3.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis