Browse Element(s) Details


OsAffx.4594.1.S1_at

Description tigr:9633.m03949
TID=OsAffx.4594.1
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=glucosyltransferase-14
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os05g4207011/11UDP-glucose:flavonoid-O-glucosyltransferase, putative
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os05g42010Os.27655.1.A1_a_at11/115+24506106..24509799TraB family protein, expressed
LOC_Os05g42020Os.8279.1.S1_at11/115+24511711..24514051Cytokinin-O-glucosyltransferase 1, putative, expressed
LOC_Os05g42020OsAffx.15066.1.S1_x_at5/115+24511711..24514051Cytokinin-O-glucosyltransferase 1, putative, expressed
LOC_Os05g42020OsAffx.15066.1.S1_at1/115+24511711..24514051Cytokinin-O-glucosyltransferase 1, putative, expressed
LOC_Os05g42030Os.14919.1.S1_at4/115+24518779..24521724hypothetical protein
LOC_Os05g42030OsAffx.29313.1.S1_at1/115+24518779..24521724hypothetical protein
LOC_Os05g42040Os.28129.1.S1_at11/115+24522508..24524718Cytokinin-O-glucosyltransferase 1, putative, expressed
LOC_Os05g42060Os.28129.1.S1_at1/115+24528548..24530014Cytokinin-O-glucosyltransferase 1, putative
LOC_Os05g42070OsAffx.4594.1.S1_at11/115+24532997..24534158UDP-glucose:flavonoid-O-glucosyltransferase, putative
LOC_Os05g42080OsAffx.27281.1.S1_at10/115+24535221..24535753expressed protein
LOC_Os05g42080OsAffx.22604.1.S1_x_at2/115+24535221..24535753expressed protein
LOC_Os05g42090OsAffx.4595.1.S1_at11/115+24537573..24538328hypothetical protein
LOC_Os05g42100Os.17764.1.S1_at10/115+24540121..24541414expressed protein
LOC_Os05g42110NANA5+24543296..24543595hypothetical protein
LOC_Os05g42120Os.56954.1.S1_at10/115+24544014..24545955heat shock protein, putative, expressed
LOC_Os05g42130Os.53020.1.S1_at11/115+24547965..24549508GRAS family transcription factor containing protein, expressed
LOC_Os05g42140OsAffx.15067.1.S1_at11/115+24549853..24550554expressed protein

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Gene Ontology Classification
GO idTypeName
GO:0008194molecular_functionUDP-glycosyltransferase activity
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.4594.1.S1_at--61--1831Chr05:24533286..24533310 (25 bp)
ACGCCTGGCGCATCAACGCGGTGGC
LOC_Os05g42070
OsAffx.4594.1.S1_at--322--991Chr05:24533340..24533364 (25 bp)
AGGAGTCCCTCGTCAGGGAGCTCCG
LOC_Os05g42070
OsAffx.4594.1.S1_at--1090--7091Chr05:24533378..24533402 (25 bp)
GTCACCGACGCGCACTTCTTCTGGA
LOC_Os05g42070
OsAffx.4594.1.S1_at--196--9451Chr05:24533424..24533448 (25 bp)
TCGGCGTGCCGTGCGTTCAGTTCTA
LOC_Os05g42070
OsAffx.4594.1.S1_at--616--7291Chr05:24533434..24533458 (25 bp)
GTGCGTTCAGTTCTACGCCATCGGC
LOC_Os05g42070
OsAffx.4594.1.S1_at--1052--6191Chr05:24533866..24533889 (24 bp)
GAGGCTGCCGGGAAGCCATTCCTGT
LOC_Os05g42070
OsAffx.4594.1.S1_at--163--6631Chr05:24533968..24533992 (25 bp)
GTTGGGCCCCACAAAAGGCGATACT
LOC_Os05g42070
OsAffx.4594.1.S1_at--33--6471Chr05:24533987..24534011 (25 bp)
GATACTGGCCCACCCGTCAGTGGGT
LOC_Os05g42070
OsAffx.4594.1.S1_at--45--7011Chr05:24534054..24534078 (25 bp)
GTCAGCGCCGGTGTCCCGGTCTTAA
LOC_Os05g42070
OsAffx.4594.1.S1_at--887--7231Chr05:24534066..24534090 (25 bp)
GTCCCGGTCTTAACATGGCCAATGG
LOC_Os05g42070
OsAffx.4594.1.S1_at--1076--7411Chr05:24534090..24534114 (25 bp)
GTGTTCGAGCAGCTGGATTTTTCAC
LOC_Os05g42070
Target Sequence 
ACGCCTGGCGCATCAACGCGGTGGCCGACGACGAGGCGCTGATGCGGCCGGCGCAGGAGTCCCTCGTCAGGGAGCTCCGC
CCTGACGTCATCGTCACCGACGCGCACTTCTTCTGGAACGCCGGCCTCGCCGACGAGCTCGGCGTGCCGTGCGTTCAGTT
CTACGCCATCGGCGCCTTCTCCACCATCGCCATGGCCCACCTCGTCGGCGCCGTCAAGGAAGGCGCCAAGGAGGCTGCCG
GGAAGCCATTCCTGTGGGTGGTGAGGACTGACATGTGGGCCCCACCCGATGGCTGGAAGGAGAGGGTCGGGGACAGGGGG
ATGGTCATCAGAGGTTGGGCCCCACAAAAGGCGATACTGGCCCACCCGTCAGTGGGTGCCTTCGTGACGCAATGCGGGTG
GAACTCGGTGCTAGAGGCGGTCAGCGCCGGTGTCCCGGTCTTAACATGGCCAATGGTGTTCGAGCAGCTGGATTTTTCAC

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.4594.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis