Browse Element(s) Details


Os.14101.3.S1_at

Description gb:CR278372
DB_XREF= gi:44664938
DB_XREF=CR278372
CLONE=p615b11p3
TID=Os.14101.3
CNT=3
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.14101 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) putative GDSL-motif lipasehydrolase (B1088C09.8), mRNA
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g6120011/11GDSL-like Lipase/Acylhydrolase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g61120Os.26965.1.S1_at11/111+35713613..35718462expressed protein
LOC_Os01g61130NANA1+35719409..35720698retrotransposon protein, putative, LINE subclass
LOC_Os01g61140OsAffx.21477.2.S1_at1/111+35721084..35722483retrotransposon protein, putative, unclassified
LOC_Os01g61150Os.33817.1.S1_at11/111+35723015..35727097PX domain containing protein, expressed
LOC_Os01g61160Os.34310.1.S1_at11/111+35729644..35732156laccase, putative, expressed
LOC_Os01g61170Os.55669.1.S1_at1/111+35734779..35735447prenylated rab acceptor, putative
LOC_Os01g61180Os.27852.1.S1_at11/111+35736139..35738548Exo70 exocyst complex subunit family protein, expressed
LOC_Os01g61190Os.14101.2.S1_at11/111+35739779..35744313Exo70 exocyst complex subunit family protein, expressed
LOC_Os01g61190Os.14101.1.S1_at11/111+35739779..35744313Exo70 exocyst complex subunit family protein, expressed
LOC_Os01g61200Os.14101.3.S1_at11/111+35742555..35744023GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g61210OsAffx.21770.1.S1_at11/111+35747882..35748508Pathogenesis-related protein Bet v I family protein, expressed
LOC_Os01g61220NANA1+35754317..35754886hypothetical protein
LOC_Os01g61230Os.42521.1.S1_at10/111+35757730..35759729NAD dependent epimerase/dehydratase family protein, expressed
LOC_Os01g61240OsAffx.11683.1.S1_at10/111+35760750..35762644Gamma interferon inducible lysosomal thiol reductase family protein
LOC_Os01g61250Os.23688.1.A1_x_at11/111+35763608..35768583dehydration-responsive protein, putative, expressed
LOC_Os01g61250Os.42520.1.A1_x_at8/111+35763608..35768583dehydration-responsive protein, putative, expressed

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Gene Ontology Classification
GO idTypeName
GO:0016789molecular_functioncarboxylic ester hydrolase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.14101.3.S1_at--564--1111Chr01:35743426..35743450 (25 bp)
AGTGTACTCCGGATAGCACAGGCTT
LOC_Os01g61200
Os.14101.3.S1_at--502--1031Chr01:35743236..35743260 (25 bp)
AGGTCTTCCACCATTTGGCTGCACA
LOC_Os01g61200
Os.14101.3.S1_at--769--7971Chr01:35743152..35743176 (25 bp)
GGATGCCCAGGCCTACAACTCTAAA
LOC_Os01g61200
Os.14101.3.S1_at--494--2691Chr01:35743121..35743145 (25 bp)
AAGCTACTTCCAGCATTGCAAGGCT
LOC_Os01g61200
Os.14101.3.S1_at--607--9011Chr01:35743105..35743129 (25 bp)
TGCAAGGCTCACTCCATGGAAGCAA
LOC_Os01g61200
Os.14101.3.S1_at--420--2451Chr01:35743082..35743106 (25 bp)
AAAATTGTCTACTTGGATGCCTATC
LOC_Os01g61200
Os.14101.3.S1_at--172--571Chr01:35743043..35743067 (25 bp)
ATCCTCGACAATCCCGCTAAATATG
LOC_Os01g61200
Os.14101.3.S1_at--834--1451Chr01:35742678..35742702 (25 bp)
AGAAGTCGGACTGTTGTGCAATGCA
LOC_Os01g61200
Os.14101.3.S1_at--501--7351Chr01:35742663..35742687 (25 bp)
GTGCAATGCATTGAGCCCTATCTGC
LOC_Os01g61200
Os.14101.3.S1_at--137--3691Chr01:35742646..35742670 (25 bp)
CTATCTGCAGGAACGAGTCATCATT
LOC_Os01g61200
Os.14101.3.S1_at--83--6891Chr01:35742620..35742644 (25 bp)
GTATTTTACGATGCTGTGCACCCAA
LOC_Os01g61200
Target Sequence 
AGTGTACTCCGGATAGCACAGGCTTCTGTCAAGGAACTGTTTAGCCTGNGTGGGAGGCAGTTCTGCTTGGCAGGTCTTCC
ACCATTTGGCTGCACACCANTTCAGATTACGTTAAGTGGAGATCCTGACAGAGCATGTGTGGATGAGCAGAACAGGGATG
CCCAGGCCTACAACTCTAAACTTGAAAAGCTACTTCCAGCATTGCAAGGCTCACTCCATGGAAGCAAAATTGTCTACTTG
GATGCCTATCAAGCTTTCAAGGAGATCCTCGACAATCCCGCTAAATATGGATTTATAGAGATAACACGAGGATGTTGTGG
GACTGGGCTCANAGAAGTCGGACTGTTGTGCAATGCATTGAGCCCTATCTGCAGGAACGAGTCATCATTTGTATTTTACG
ATGCTGTGCACCCAA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.14101.3.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis