Browse Element(s) Details


Os.46591.2.S1_x_at

Description gb:NM_197185.1
DB_XREF= gi:37535729
TID=Os.46591.2
CNT=1
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.46591 (NCBI UniGene Cluster)
DEF=Oryza sativa (japonica cultivar-group) putative epoxide hydrolase (OSJNBa0017E08.11), mRNA.
PROD=putative epoxide hydrolase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os10g3553010/11epoxide hydrolase, putative, expressed
LOC_Os10g355201/11epoxide hydrolase, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os10g35460Os.15633.1.S2_at11/1110+18646403..18649458COBRA-like protein 2 precursor, putative, expressed
LOC_Os10g35460Os.15633.1.S1_at11/1110+18646403..18649458COBRA-like protein 2 precursor, putative, expressed
LOC_Os10g35470Os.15848.1.A1_a_at11/1110+18651758..18655606prolyl 4-hydroxylase alpha subunit, putative, expressed
LOC_Os10g35480Os.19949.1.S1_s_at11/1110+18657099..18659375Lanthionine synthetase C-like protein, expressed
LOC_Os10g35480Os.46469.1.S1_at11/1110+18657099..18659375Lanthionine synthetase C-like protein, expressed
LOC_Os10g35490Os.46397.1.S1_x_at11/1110+18659706..18661510epoxide hydrolase, putative, expressed
LOC_Os10g35500Os.48028.1.S1_x_at11/1110+18664962..18667187expressed protein
LOC_Os10g35500Os.53171.1.S1_at11/1110+18664962..18667187expressed protein
LOC_Os10g35500OsAffx.12199.1.A1_at1/1110+18664962..18667187expressed protein
LOC_Os10g35510Os.47130.4.A1_x_at3/1110+18668119..18668442retrotransposon protein, putative, unclassified
LOC_Os10g35520Os.23214.1.S1_at11/1110+18669203..18671431epoxide hydrolase, putative, expressed
LOC_Os10g35520Os.46591.1.S1_x_at1/1110+18669203..18671431epoxide hydrolase, putative, expressed
LOC_Os10g35520Os.46591.2.S1_x_at1/1110+18669203..18671431epoxide hydrolase, putative, expressed
LOC_Os10g35530Os.46591.2.S1_x_at10/1110+18672608..18674568epoxide hydrolase, putative, expressed
LOC_Os10g35530Os.46591.1.S1_x_at10/1110+18672608..18674568epoxide hydrolase, putative, expressed
LOC_Os10g35530Os.46591.1.S1_at9/1110+18672608..18674568epoxide hydrolase, putative, expressed
LOC_Os10g35540Os.46650.1.S1_at11/1110+18676322..18678143hydrolase, alpha/beta fold family protein, expressed
LOC_Os10g35550Os.21457.1.S1_at11/1110+18680095..18684612U5 snRNP-associated 102 kDa protein, putative, expressed
LOC_Os10g35550Os.10271.2.S1_x_at4/1110+18680095..18684612U5 snRNP-associated 102 kDa protein, putative, expressed
LOC_Os10g35560Os.20562.1.S1_a_at11/1110+18686213..18695782expressed protein
LOC_Os10g35570Os.46599.1.S1_at11/1110+18698524..18703936expressed protein

Select all/Clear all

Gene Ontology Classification
GO idTypeName
GO:0004301molecular_functionepoxide hydrolase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.46591.2.S1_x_at--612--9151NONE
TGCCCAAGGCCTTTCTTGTTGGGAA
NONE
Os.46591.2.S1_x_at--936--7551Chr10:18673635..18673659 (25 bp)
GGGCCATGCCAGCTTATAGTTTTGC
LOC_Os10g35530
Os.46591.2.S1_x_at--370--291Chr10:18673650..18673674 (25 bp)
ATAGTTTTGCTCTCTGTCATCCAAA
LOC_Os10g35530
Os.46591.2.S1_x_at--93--8731Chr10:18673664..18673860 (25 bp)
TGTCATCCAAATCCAACCAGGAAGA
LOC_Os10g35530
Os.46591.2.S1_x_at--778--10151Chr10:18673887..18673911 (25 bp)
TATCAGGAGAGTCGTGCGCACTATC
LOC_Os10g35530
Os.46591.2.S1_x_at--620--3691Chr10:18673907..18673931 (25 bp)
CTATCTACATACTCTTCTCTAGGAA
LOC_Os10g35530
Os.46591.2.S1_x_at--257--10091Chr10:18673926..18673950 (25 bp)
TAGGAACGAGATCCCCATAGCTAAG
LOC_Os10g35530
Os.46591.2.S1_x_at--1134--8012Chr10:18674013..18674037 (25 bp)
GGAGGATCTTGATGTCTACTCATCC
LOC_Os10g35530
Os.46591.2.S1_x_at--176--8591Chr10:18674052..18674076 (25 bp)
TGGTTTTCGATATCCGCTACAGATG
LOC_Os10g35530
Os.46591.2.S1_x_at--1086--5831Chr10:18674314..18674338 (25 bp)
GACCTAAAGATCACCTACATTCCTG
LOC_Os10g35530
Os.46591.2.S1_x_at--874--8051Chr10:18674358..18674382 (25 bp)
GGAGCAGTTCCCTGAGTTTGTGAAT
LOC_Os10g35530
Target Sequence 
TGCCCAAGGCCTTTCTTGTTGGGAAGGACTTTGGGGCCATGCCAGCTTATAGTTTTGCTCTCTGTCATCCAAATCCAACC
AGGAAGAGCAGAAGCTGACTTTGGCAAGTATGATATCAGGAGAGTCGTGCGCACTATCTACATACTCTTCTCTAGGAACG
AGATCCCCATAGCTAAGGAAGATCAAGAGATCATGGATCTTGCAGACTTATCGACACCCCTCCCCGAGTGGTTTAGTGAG
GAGGATCTTGATGTCTACTCATCCCTCTATGAGAAGTCTGGTTTTCGATATCCGCTACAGATGCCATATAGGTCCATGCA
TCAAAACAAACCAATTGGAGATGCAAAATTTCAAGTCCCGGTGTTTGTTGTCATGGGAGAGAAAGATTATGTCTTCAAGA
TACCTGGTATCGAGTCTGTTATGAAAGACGGCAGCATGGAGAAGCATGCACCAGACCTAAAGATCACCTACATTCCTGAA
GGAAGCCATTTTGTGCAGGAGCAGTTCCCTGAGTTTGTGAAT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.46591.2.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis