Browse Element(s) Details


Os.14750.1.S1_x_at

Description gb:AK065415.1
DB_XREF= gi:32975433
TID=Os.14750.1
CNT=6
FEA=FLmRNA
TIER=FL
STK=1
UG=Os.14750 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) putative decarboxylase (OSJNBb0096M04.135), mRNA
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J013023C05, full insert sequence.
FL= gb:AK065415.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os03g630749/11Ser/Thr protein phosphatase family protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os03g63020Os.8119.1.S1_at11/113+35572600..35577646Serine/threonine-protein kinase MHK, putative, expressed
LOC_Os03g63030Os.35344.18.S1_x_at11/113+35579471..35583282transposon protein, putative, Mutator sub-class
LOC_Os03g63030Os.35344.3.S1_x_at9/113+35579471..35583282transposon protein, putative, Mutator sub-class
LOC_Os03g63030OsAffx.22940.5.S1_x_at3/113+35579471..35583282transposon protein, putative, Mutator sub-class
LOC_Os03g63040Os.51390.1.S1_at5/113+35586951..35591762expressed protein
LOC_Os03g63040Os.51390.1.S1_x_at5/113+35586951..35591762expressed protein
LOC_Os03g63040Os.5292.1.S1_at4/113+35586951..35591762expressed protein
LOC_Os03g63050OsAffx.10401.1.S1_at6/113+35592938..35593615hypothetical protein
LOC_Os03g63060Os.15918.1.S1_x_at11/113+35596426..35597816P21-Rho-binding domain containing protein, expressed
LOC_Os03g63074Os.16644.1.A1_at11/113+35598767..35605915Ser/Thr protein phosphatase family protein, expressed
LOC_Os03g63074Os.14750.1.S1_x_at9/113+35598767..35605915Ser/Thr protein phosphatase family protein, expressed
LOC_Os03g63074Os.14750.1.S1_at1/113+35598767..35605915Ser/Thr protein phosphatase family protein, expressed
LOC_Os03g63090Os.16908.1.S1_at11/113+35608593..35611728Actin-related protein 2/3 complex subunit 4, putative, expressed
LOC_Os03g63110Os.35410.1.S1_at11/113+35612602..35615784B-cell receptor-associated protein 31-like containing protein, expressed
LOC_Os03g63124Os.28346.5.S1_at11/113+35616990..35624977retrotransposon protein, putative, unclassified
LOC_Os03g63124Os.28346.5.S1_x_at11/113+35616990..35624977retrotransposon protein, putative, unclassified
LOC_Os03g63124Os.28346.3.S1_x_at10/113+35616990..35624977retrotransposon protein, putative, unclassified
LOC_Os03g63124Os.28346.4.S1_x_at8/113+35616990..35624977retrotransposon protein, putative, unclassified
LOC_Os03g63140Os.8727.1.S1_at10/113+35628426..35631287Nitrate-induced NOI protein, expressed
LOC_Os03g63140OsAffx.25806.1.S1_at2/113+35628426..35631287Nitrate-induced NOI protein, expressed

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Gene Ontology Classification
GO idTypeName
GO:0003993molecular_functionacid phosphatase activity
GO:0004722molecular_functionprotein serine/threonine phosphatase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.14750.1.S1_x_at--1156--8171Chr03:35599331..35599355 (25 bp)
GGAAGCCTCAATCTGAACATAGCAT
LOC_Os03g63074
Os.14750.1.S1_x_at--205--2171Chr03:35599291..35599315 (25 bp)
ACACCTGCATGGTTCTCCAGAAGCA
LOC_Os03g63074
Os.14750.1.S1_x_at--44--451Chr03:35599241..35599265 (25 bp)
ATCTAGCTGCTCTTGTAAGTTTCAA
LOC_Os03g63074
Os.14750.1.S1_x_at--1153--1851NONE
ACGAGTGTTCTACAGCGTGTACCAA
NONE
Os.14750.1.S1_x_at--458--5111Chr03:35599159..35599183 (25 bp)
GCACATCATTGCAGTGACCATTTAT
LOC_Os03g63074
Os.14750.1.S1_x_at--812--1371Chr03:35599072..35599096 (25 bp)
AGACCACTCAAACCTGGTGCTCAGG
LOC_Os03g63074
Os.14750.1.S1_x_at--602--6331Chr03:35598943..35598967 (25 bp)
GATGCAGTTAGGTTTGTCACGGGTT
LOC_Os03g63074
Os.14750.1.S1_x_at--677--7071Chr03:35598928..35598952 (25 bp)
GTCACGGGTTGGCTTTTTGCCAGAA
LOC_Os03g63074
Os.14750.1.S1_x_at--131--5691Chr03:35598880..35598904 (25 bp)
GACTTGAGAGCTAACTCTGTGCCCC
LOC_Os03g63074
Os.14750.1.S1_x_at--911--3331Chr03:35598855..35598879 (25 bp)
CACTGTACTGTTTGTTTTGCTCTCA
LOC_Os03g63074
Os.14750.1.S1_x_at--881--3071Chr03:35598755..35598776 (22 bp)
AATCAGCATCTGTACTCTTCATATT
NONE
Target Sequence 
GGAAGCCTCAATCTGAACATAGCATCAGGTACAAGNTTGCACACCTGCATGGTTCTCCAGAAGCATGTTGAGAGGTTGAT
CGATCAAGGAATCTAGCTGCTCTTGTAAGTTTCAACATCAACTCAAGAATTCACGAGTGTTCTACAGCGTGTACCAAAAG
AATCAGCTTATAGCACATCATTGCAGTGACCATTTATATATTCATTTCTAGTACTAGAAGTCTAGAACAGCTAAATACAA
AGCAATACTTGCAAATTAAAGACCACTCAAACCTGGTGCTCAGGGGTTGAGGGCATGATACTAAAGTAGCAGATTTAGTT
GCTAGAATTAATTTAGTGCTTAATCCACTTATAAATTGCAATCACCAACCAAGAAGTAATGTGGTGATGATGCAGTTAGG
TTTGTCACGGGTTGGCTTTTTGCCAGAAGTGAGCTCACCATAAACAANAAGGACTTGAGAGCTAACTCTGTGCCCCCACT
GTACTGTTTGTTTTGCTCTCAATCATGTAATCACAGAAAAACTATTTTTTGGACNGATTGATCTCATGTAATCCAAACTT
ACTGTGATAAACAATCAGCATCTGTACTCTTCATATT

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.14750.1.S1_x_at     

Putative homologies in rice

Putative homologies in arabidopsis