Browse Element(s) Details


Os.37762.1.S1_a_at

Description gb:AK100099.1
DB_XREF= gi:32985308
TID=Os.37762.1
CNT=5
FEA=FLmRNA
TIER=FL
STK=1
UG=Os.37762 (NCBI UniGene Cluster)
UG_TITLE=(japonica cultivar-group) putative glucose inhibited division protein A (P0401G10.21), mRNA
DEF=Oryza sativa (japonica cultivar-group) cDNA clone:J023004D21, full insert sequence.
FL= gb:AK105000.2 gb:AK100099.1
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g7298011/11Glucose-inhibited division protein A, putative, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g72940Os.43012.1.A1_at11/111+42630356..42638025Phosphatidylserine decarboxylase, putative, expressed
LOC_Os01g72940OsAffx.13130.1.S1_at1/111+42630356..42638025Phosphatidylserine decarboxylase, putative, expressed
LOC_Os01g72950Os.15864.1.S1_s_at11/111+42639032..42640425expressed protein
LOC_Os01g72960Os.5845.1.S1_at11/111+42642112..42644527expressed protein
LOC_Os01g72970Os.20750.1.S1_at9/111+42652671..42655912expressed protein
LOC_Os01g72980Os.37762.2.S1_x_at11/111+42656135..42662602Glucose-inhibited division protein A, putative, expressed
LOC_Os01g72980Os.37762.1.S1_a_at11/111+42656135..42662602Glucose-inhibited division protein A, putative, expressed
LOC_Os01g72980Os.37762.1.S1_at10/111+42656135..42662602Glucose-inhibited division protein A, putative, expressed
LOC_Os01g72990Os.15212.1.A1_a_at11/111+42663065..42675564leucine-rich repeat transmembrane protein kinase, putative, expressed
LOC_Os01g72990OsAffx.4937.1.S1_s_at11/111+42663065..42675564leucine-rich repeat transmembrane protein kinase, putative, expressed
LOC_Os01g72990OsAffx.4937.1.S1_x_at2/111+42663065..42675564leucine-rich repeat transmembrane protein kinase, putative, expressed
LOC_Os01g72990OsAffx.26592.1.S1_at2/111+42663065..42675564leucine-rich repeat transmembrane protein kinase, putative, expressed
LOC_Os01g73000Os.7525.1.S1_at11/111+42677791..42682124Copine family protein, expressed
LOC_Os01g73000OsAffx.11835.1.S1_x_at11/111+42677791..42682124Copine family protein, expressed

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Gene Ontology Classification
GO idTypeName
NONENONENONE
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.37762.1.S1_a_at--13--5171Chr01:42656689..42656713 (25 bp)
GCAACCGTCGCATGGCTAACTACAA
LOC_Os01g72980
Os.37762.1.S1_a_at--223--1791Chr01:42656686..42656710 (25 bp)
ACCGTCGCATGGCTAACTACAAGAG
LOC_Os01g72980
Os.37762.1.S1_a_at--158--9351Chr01:42656682..42656706 (25 bp)
TCGCATGGCTAACTACAAGAGACAG
LOC_Os01g72980
Os.37762.1.S1_a_at--102--5991Chr01:42656664..42656688 (25 bp)
GAGACAGCAAAGCACGTTGAGATCT
LOC_Os01g72980
Os.37762.1.S1_a_at--174--2351Chr01:42656656..42656680 (25 bp)
AAAGCACGTTGAGATCTGCTGCGAC
LOC_Os01g72980
Os.37762.1.S1_a_at--1080--5091Chr01:42656653..42656677 (25 bp)
GCACGTTGAGATCTGCTGCGACCAA
LOC_Os01g72980
Os.37762.1.S1_a_at--888--6651Chr01:42656649..42656673 (25 bp)
GTTGAGATCTGCTGCGACCAAGGCA
LOC_Os01g72980
Os.37762.1.S1_a_at--972--5851Chr01:42656634..42656658 (25 bp)
GACCAAGGCAGATGATTCTTCAGAC
LOC_Os01g72980
Os.37762.1.S1_a_at--230--931Chr01:42656629..42656653 (25 bp)
AGGCAGATGATTCTTCAGACGAAGT
LOC_Os01g72980
Os.37762.1.S1_a_at--538--6571Chr01:42656621..42656645 (25 bp)
GATTCTTCAGACGAAGTGGTTCATG
LOC_Os01g72980
Os.37762.1.S1_a_at--492--5791Chr01:42656612..42656636 (25 bp)
GACGAAGTGGTTCATGCCAGTGCCA
LOC_Os01g72980
Target Sequence 
GCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGAC
GAAGTGGTTCATGCCAGTGCCA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.37762.1.S1_a_at     

Putative homologies in rice

Putative homologies in arabidopsis