Browse Element(s) Details


Os.44937.1.S1_at

Description gb:NM_185160.1
DB_XREF= gi:34897405
GEN=OSJNBb0081B07.16
TID=Os.44937.1
CNT=4
FEA=mRNA
TIER=ConsEnd
STK=0
UG=Os.44937 (NCBI UniGene Cluster)
DEF=Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBb0081B07.16), mRNA.
PROD=putative receptor-like protein kinase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os03g6081011/11Protein kinase domain containing protein, expressed
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os03g60730Os.14508.1.S1_at11/113+34460682..34464908BED zinc finger family protein, expressed
LOC_Os03g60730Os.14508.2.S1_x_at11/113+34460682..34464908BED zinc finger family protein, expressed
LOC_Os03g60740Os.17911.1.S1_at11/113+34465420..34468030expressed protein
LOC_Os03g60750Os.37217.2.S1_at11/113+34468139..34470365FtsJ-like methyltransferase family protein, putative, expressed
LOC_Os03g60760Os.37217.1.S1_at11/113+34472116..34472762expressed protein
LOC_Os03g60780Os.6349.1.S1_a_at11/113+34475214..34478234Armadillo/beta-catenin-like repeat family protein, expressed
LOC_Os03g60790Os.33670.3.S1_s_at11/113+34478451..34480250DnaJ domain containing protein, expressed
LOC_Os03g60790Os.33670.2.S1_at11/113+34478451..34480250DnaJ domain containing protein, expressed
LOC_Os03g60790Os.33670.1.S1_at11/113+34478451..34480250DnaJ domain containing protein, expressed
LOC_Os03g60790Os.33670.3.S1_x_at11/113+34478451..34480250DnaJ domain containing protein, expressed
LOC_Os03g60800Os.26905.2.S1_x_at11/113+34480491..34484229hAT family dimerisation domain containing protein, expressed
LOC_Os03g60800Os.26905.1.A1_at9/113+34480491..34484229hAT family dimerisation domain containing protein, expressed
LOC_Os03g60810Os.44937.1.S1_at11/113+34484417..34486932Protein kinase domain containing protein, expressed
LOC_Os03g60820Os.6533.1.S1_at11/113+34493583..34499758sugar transporter family protein, putative, expressed
LOC_Os03g60820Os.5150.1.S1_at10/113+34493583..34499758sugar transporter family protein, putative, expressed
LOC_Os03g60830Os.35344.3.S1_x_at6/113+34502382..34503607hypothetical protein
LOC_Os03g60830Os.35344.18.S1_x_at5/113+34502382..34503607hypothetical protein
LOC_Os03g60830OsAffx.22940.5.S1_x_at3/113+34502382..34503607hypothetical protein
LOC_Os03g60840Os.7612.1.S1_at10/113+34506004..34507021Bowman-Birk serine protease inhibitor family protein, expressed

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Gene Ontology Classification
GO idTypeName
GO:0016301molecular_functionkinase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
Os.44937.1.S1_at--820--5971Chr03:34484819..34484843 (25 bp)
GAGACGTTGCCGGAGGACCTAGAAT
LOC_Os03g60810
Os.44937.1.S1_at--184--6731Chr03:34484781..34484805 (25 bp)
GTTCTACGACGAGTCATTCGACGAG
LOC_Os03g60810
Os.44937.1.S1_at--600--9211Chr03:34484738..34484762 (25 bp)
TCCACGTCGGAGATCACCACGTCGA
LOC_Os03g60810
Os.44937.1.S1_at--68--7931Chr03:34484682..34484706 (25 bp)
GGTTGGCTGTGTTCAGTTGAGCACT
LOC_Os03g60810
Os.44937.1.S1_at--73--5951Chr03:34484664..34484688 (25 bp)
GAGCACTGCCGATTTTCTGAAGACA
LOC_Os03g60810
Os.44937.1.S1_at--1095--7111Chr03:34484622..34484646 (25 bp)
GTCAGTGAGCAAATACTTGCAGCAT
LOC_Os03g60810
Os.44937.1.S1_at--777--10831Chr03:34484586..34484610 (25 bp)
TTGGGCTTTGGATCTTCTGGAGTTA
LOC_Os03g60810
Os.44937.1.S1_at--123--291Chr03:34484556..34484580 (25 bp)
ATAGGGATACTGTCAATCATTTTCA
LOC_Os03g60810
Os.44937.1.S1_at--443--3371Chr03:34484494..34484518 (25 bp)
CAGCATTCAGCTTAGAAGTTACCTT
LOC_Os03g60810
Os.44937.1.S1_at--389--2831Chr03:34484479..34484503 (25 bp)
AAGTTACCTTGTTGCAGTTTCAGAA
LOC_Os03g60810
Os.44937.1.S1_at--1071--5271Chr03:34484454..34484478 (25 bp)
GAATGTACACCTGCAAGAAGGCAAG
LOC_Os03g60810
Target Sequence 
GAGACGTTGCCGGAGGACCTAGAATGCGGCGTGGGNCAGTTCTACGACGAGTCATTCGACGAGTTCGTCACCGGCTTCCC
GTCCACGTCGGAGATCACCACGTCGACGACGCAGTCCACCGACGAGCAGCAGCGGCTGGTTGGCTGTGTTCAGTTGAGCA
CTGCCGATTTTCTGAAGACAACTTAAAATGTAAAAATGTCAGTGAGCAAATACTTGCAGCATTAGGTGATTGTTTGGGCT
TTGGATCTTCTGGAGTTAGTAACATAGGGATACTGTCAATCATTTTCAGATATGATCATATAGAGGTTTTGATCAAAGAT
TAGTACAGCATTCAGCTTAGAAGTTACCTTGTTGCAGTTTCAGAAGAATGTACACCTGCAAGAAGGCAAG

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around Os.44937.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis