Browse Element(s) Details


OsAffx.2251.1.S1_at

Description tigr:9629.m04422
TID=OsAffx.2251.1
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=GDSL-like LipaseAcylhydrolase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g4621011/11GDSL-like Lipase/Acylhydrolase family protein
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g46169Os.21387.2.S1_s_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169OsAffx.839.1.S1_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169OsAffx.23683.1.S1_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.35566.1.A1_x_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.21387.3.S1_at10/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.21387.3.S1_x_at9/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.43567.1.S1_x_at8/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.34087.4.S1_x_at6/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.34087.1.S1_x_at4/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.38172.1.S1_x_at4/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.53217.1.S1_x_at3/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.50463.1.S1_at1/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.34087.2.A1_x_at1/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169OsAffx.32238.1.S1_x_at1/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46200Os.33614.1.S1_at11/111+26604924..26611785expressed protein
LOC_Os01g46200Os.53065.1.S1_at11/111+26604924..26611785expressed protein
LOC_Os01g46210OsAffx.2251.1.S1_at11/111+26613289..26614758GDSL-like Lipase/Acylhydrolase family protein
LOC_Os01g46220OsAffx.9221.1.S1_at11/111+26617082..26619075GDSL-like Lipase/Acylhydrolase family protein
LOC_Os01g46230NANA1+26620053..26621849pentatricopeptide, putative
LOC_Os01g46240OsAffx.11486.1.S1_s_at11/111+26623542..26625455lipase class 3 family protein, putative, expressed
LOC_Os01g46250OsAffx.23684.1.S1_x_at11/111+26627042..26629765Lipase family protein
LOC_Os01g46260Os.57336.1.S1_at10/111+26633086..26634085expressed protein
LOC_Os01g46270OsAffx.9219.1.S1_at11/111+26638916..26639962wax synthase isoform 2, putative, expressed

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Gene Ontology Classification
GO idTypeName
GO:0016298molecular_functionlipase activity
GO:0016789molecular_functioncarboxylic ester hydrolase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.2251.1.S1_at--522--2611Chr01:26614189..26614213 (25 bp)
AACCTCGGCGCGAAGACCGTGCTGG
LOC_Os01g46210
OsAffx.2251.1.S1_at--618--2771Chr01:26614201..26614225 (25 bp)
AAGACCGTGCTGGTCCCGGGCAACT
LOC_Os01g46210
OsAffx.2251.1.S1_at--919--7691Chr01:26614297..26614321 (25 bp)
GGGTGCATCGCGTGGTTCAACGACT
LOC_Os01g46210
OsAffx.2251.1.S1_at--941--10491Chr01:26614312..26614336 (25 bp)
TTCAACGACTTCTCAAGGCAGCACA
LOC_Os01g46210
OsAffx.2251.1.S1_at--44--1451Chr01:26614376..26614400 (25 bp)
AGAACCCCGGCGTGAGGCTCATCTA
LOC_Os01g46210
OsAffx.2251.1.S1_at--542--1411Chr01:26614445..26614571 (25 bp)
AGAACTACGGTATCGGTGACCCTCT
LOC_Os01g46210
OsAffx.2251.1.S1_at--911--8931Chr01:26614563..26614587 (25 bp)
TGACCCTCTGCTGGAGTGCTGCGGC
LOC_Os01g46210
OsAffx.2251.1.S1_at--474--6971Chr01:26614599..26614623 (25 bp)
GTACCACACCGGCATGACGTGCAAC
LOC_Os01g46210
OsAffx.2251.1.S1_at--527--5751Chr01:26614614..26614638 (25 bp)
GACGTGCAACAAGACAGCCAAGGTT
LOC_Os01g46210
OsAffx.2251.1.S1_at--868--7271Chr01:26614675..26614699 (25 bp)
GTCCACATGACGGAGAAGGCCTACA
LOC_Os01g46210
OsAffx.2251.1.S1_at--590--1471Chr01:26614688..26614712 (25 bp)
AGAAGGCCTACAGCATCATCGCCGA
LOC_Os01g46210
Target Sequence 
AACCTCGGCGCGAAGACCGTGCTGGTCCCGGGCAACTTCCCGTTCGGGTGCGCCCCGGAGTACCTCCAGGGCTTCCAGAG
CAGCAACACCTCCGACTACGACGCCACCGGGTGCATCGCGTGGTTCAACGACTTCTCAAGGCAGCACAACCAGGCGCTGG
TGCAGGAGGTCGCCCGCCTCAGGTCGCAGAACCCCGGCGTGAGGCTCATCTACGCCGACTACTACGGCGCCGCCTTGGAG
TTCTTCAAGAACCCCAAGAACTACGGTATCGGTGACCCTCTGCTGGAGTGCTGCGGCGGCGACGGCCCGTACCACACCGG
CATGACGTGCAACAAGACAGCCAAGGTTTGGGGGTCCCCGGCCAACTTCGCCAGCTGGGACGGCGTCCACATGACGGAGA
AGGCCTACAGCATCATCGCCGA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.2251.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis