Browse Element(s) Details


OsAffx.9221.1.S1_at

Description tigr:9629.m04423
TID=OsAffx.9221.1
CNT=2
FEA=mRNA
TIER=ConsEnd
STK=0
NOTE=sequence(s) not in UniGene
DEF=GDSL-like LipaseAcylhydrolase
REP_ORG=O. sativa
Associated TIGR Gene Locus
TIGR LocusMatching ProbesDescription
LOC_Os01g4622011/11GDSL-like Lipase/Acylhydrolase family protein
Gene Context (flanking 25kb)
TIGR LocusMatching ProbesetMatching ProbesChrStrandCoordinatesDescription
LOC_Os01g46169Os.21387.2.S1_s_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169OsAffx.839.1.S1_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169OsAffx.23683.1.S1_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.35566.1.A1_x_at11/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.21387.3.S1_at10/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.21387.3.S1_x_at9/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.43567.1.S1_x_at8/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.34087.4.S1_x_at6/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.34087.1.S1_x_at4/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.38172.1.S1_x_at4/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.53217.1.S1_x_at3/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.50463.1.S1_at1/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169Os.34087.2.A1_x_at1/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46169OsAffx.32238.1.S1_x_at1/111+26576234..26601032GDSL-like Lipase/Acylhydrolase family protein, expressed
LOC_Os01g46200Os.33614.1.S1_at11/111+26604924..26611785expressed protein
LOC_Os01g46200Os.53065.1.S1_at11/111+26604924..26611785expressed protein
LOC_Os01g46210OsAffx.2251.1.S1_at11/111+26613289..26614758GDSL-like Lipase/Acylhydrolase family protein
LOC_Os01g46220OsAffx.9221.1.S1_at11/111+26617082..26619075GDSL-like Lipase/Acylhydrolase family protein
LOC_Os01g46230NANA1+26620053..26621849pentatricopeptide, putative
LOC_Os01g46240OsAffx.11486.1.S1_s_at11/111+26623542..26625455lipase class 3 family protein, putative, expressed
LOC_Os01g46250OsAffx.23684.1.S1_x_at11/111+26627042..26629765Lipase family protein
LOC_Os01g46260Os.57336.1.S1_at10/111+26633086..26634085expressed protein
LOC_Os01g46270OsAffx.9219.1.S1_at11/111+26638916..26639962wax synthase isoform 2, putative, expressed
LOC_Os01g46280OsAffx.9218.1.S1_s_at11/111+26642801..26644207hypothetical protein
LOC_Os01g46280OsAffx.9218.2.S1_at11/111+26642801..26644207hypothetical protein

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Gene Ontology Classification
GO idTypeName
GO:0016298molecular_functionlipase activity
GO:0016789molecular_functioncarboxylic ester hydrolase activity
Probe Info
Probe NameHit(s)LocationSequenceTIGR Locus
OsAffx.9221.1.S1_at--1148--4091Chr01:26618268..26618292 (25 bp)
CGACTACAACTTTTGGTTCTTAGAT
LOC_Os01g46220
OsAffx.9221.1.S1_at--1046--9551Chr01:26618285..26618309 (25 bp)
TCTTAGATCATAAACCTCGCGAGGT
LOC_Os01g46220
OsAffx.9221.1.S1_at--778--9331Chr01:26618301..26618325 (25 bp)
TCGCGAGGTTGCTTACCAGTTCATC
LOC_Os01g46220
OsAffx.9221.1.S1_at--213--1231Chr01:26618318..26618342 (25 bp)
AGTTCATCCCGGATGTCGTCGCCAG
LOC_Os01g46220
OsAffx.9221.1.S1_at--298--1771Chr01:26618544..26618568 (25 bp)
ACCTGAGCGCCTACCGGAGCGGCAA
LOC_Os01g46220
OsAffx.9221.1.S1_at--735--8111Chr01:26618575..26618599 (25 bp)
GGACTACGACGAGTTCCGTTGCCTC
LOC_Os01g46220
OsAffx.9221.1.S1_at--1028--2531Chr01:26618721..26618745 (25 bp)
AACTCTTCCGTAATCCACGCAGATT
LOC_Os01g46220
OsAffx.9221.1.S1_at--431--3031Chr01:26618732..26618875 (25 bp)
AATCCACGCAGATTCGGTATCAATG
LOC_Os01g46220
OsAffx.9221.1.S1_at--918--7851Chr01:26618866..26618890 (25 bp)
GGTATCAATGATCCTCTGCTCGCGT
LOC_Os01g46220
OsAffx.9221.1.S1_at--527--6831Chr01:26618966..26618990 (25 bp)
GTTTCGCCAACTGGGACGGTGTCCA
LOC_Os01g46220
OsAffx.9221.1.S1_at--221--1471Chr01:26618999..26619023 (25 bp)
AGAAGGCGTACCATGTCATCGCCGA
LOC_Os01g46220
Target Sequence 
CGACTACAACTTTTGGTTCTTAGATCATAAACCTCGCGAGGTTGCTTACCAGTTCATCCCGGATGTCGTCGCCAGCATCA
GCTCCACTGTCCAGGAGCTCATCGGTCTGGGCGCGAGGACGATCATGATCCCGGGGAACTTCCCGACCGGGTGCGTGCCG
GCGTACCTGAGCGCCTACCGGAGCGGCAACCCGGCGGACTACGACGAGTTCCGTTGCCTCCGGTGGTTCAACGCCTTCTC
CGCCGCGCACAACCAGGCGCTGCTCAACGAGGTCAGCCGGCTCAAGGCGCAGCACCCGGGCGTCAGGCTCATCTACGCCG
ACTACTTCGGCGCCGCCCTGCAACTCTTCCGTAATCCACGCAGATTCGGTATCAATGATCCTCTGCTCGCGTGCTGCGGC
GGCCATGGCCCGTACCACACCGGCGCGACGTGCGACAGGACGGCGACAGTCTGGGGTGATCCGGGCAGTTTCGCCAACTG
GGACGGTGTCCATATGACGGAGAAGGCGTACCATGTCATCGCCGA

BLASTn GenBank NR

Expression Profiles Gene Chronologer
Gene Chronologer (Grouped)
Heterosis View
Gene Correlator (coexpression analysis)
SALK RiceGE
Rice MPSS  MPSS logo
RiceArray Coexpression Database
Miscellaneous SNP data between Minghui 63 and Zhenshan 97 from OryzaSNP project:
extend bp around OsAffx.9221.1.S1_at     

Putative homologies in rice

Putative homologies in arabidopsis